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Sample GSM137719 Query DataSets for GSM137719
Status Public on Feb 20, 2007
Title 980216T
Sample type genomic
 
Source name Breast Tumor
Organism Homo sapiens
Characteristics Tissue: Breast
Extracted molecule genomic DNA
Extraction protocol Qiagen DNA extraction kit was used according to the manufacturer's instructions.
Label biotinylated dideoxy ATP
Label protocol biotinylated dideoxy ATP is terminal deoxynucleotidyl transferased
 
Hybridization protocol Following Manufactruer's protocol
Scan protocol GeneChips were scanned using the Affymetrix GeneChip Scanner GCS3000
Description SNP profiling for breast tumors
Data processing The data were analyzed Dchip software for normalization and expression estimation
 
Submission date Sep 28, 2006
Last update date Feb 20, 2007
Contact name wei chen
E-mail(s) chenwei@agenica.com
Organization name Agenica Research Pte Ltd
Street address 11 Hospital Drive
City Singapore
ZIP/Postal code 169610
Country Singapore
 
Platform ID GPL2005
Series (1)
GSE5927 SNP expression data from breast cancer

Data table header descriptions
ID_REF
VALUE Dchip generated Signal intensity

Data table
ID_REF VALUE
SNP_A-1650338 7274.79
SNP_A-1716667 9747.58
SNP_A-1712945 3082.53
SNP_A-1711654 19172
SNP_A-1717655 5076.01
SNP_A-1659842 4127.32
SNP_A-1653742 3158.33
SNP_A-1686138 7693.05
SNP_A-1696456 1902.5
SNP_A-1706789 6866.74
SNP_A-1702159 6846.25
SNP_A-1717099 7274.17
SNP_A-1692956 2188.09
SNP_A-1693565 6119.84
SNP_A-1731109 7218.28
SNP_A-1642331 8588.4
SNP_A-1713287 1767.42
SNP_A-1749711 33675.5
SNP_A-1755148 5874.91
SNP_A-1741069 1942.77

Total number of rows: 58960

Table truncated, full table size 1258 Kbytes.




Supplementary data files not provided

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