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Sample GSM137720 Query DataSets for GSM137720
Status Public on Feb 20, 2007
Title 980217T
Sample type genomic
 
Source name Breast Tumor
Organism Homo sapiens
Characteristics Tissue: Breast
Extracted molecule genomic DNA
Extraction protocol Qiagen DNA extraction kit was used according to the manufacturer's instructions.
Label biotinylated dideoxy ATP
Label protocol biotinylated dideoxy ATP is terminal deoxynucleotidyl transferased
 
Hybridization protocol Following Manufactruer's protocol
Scan protocol GeneChips were scanned using the Affymetrix GeneChip Scanner GCS3000
Description SNP profiling for breast tumors
Data processing The data were analyzed Dchip software for normalization and expression estimation
 
Submission date Sep 28, 2006
Last update date Feb 20, 2007
Contact name wei chen
E-mail(s) chenwei@agenica.com
Organization name Agenica Research Pte Ltd
Street address 11 Hospital Drive
City Singapore
ZIP/Postal code 169610
Country Singapore
 
Platform ID GPL2005
Series (1)
GSE5927 SNP expression data from breast cancer

Data table header descriptions
ID_REF
VALUE Dchip generated Signal intensity

Data table
ID_REF VALUE
SNP_A-1650338 10582.3
SNP_A-1716667 12236.5
SNP_A-1712945 6065.77
SNP_A-1711654 21386.8
SNP_A-1717655 6339.33
SNP_A-1659842 4998.6
SNP_A-1653742 4828.14
SNP_A-1686138 6109.71
SNP_A-1696456 1410.3
SNP_A-1706789 7013.54
SNP_A-1702159 6700.11
SNP_A-1717099 8029.38
SNP_A-1692956 3068.8
SNP_A-1693565 7559.99
SNP_A-1731109 7947.91
SNP_A-1642331 8804.75
SNP_A-1713287 3092.93
SNP_A-1749711 38071.1
SNP_A-1755148 7711.5
SNP_A-1741069 1874.97

Total number of rows: 58960

Table truncated, full table size 1258 Kbytes.




Supplementary data files not provided

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