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Sample GSM137721 Query DataSets for GSM137721
Status Public on Feb 20, 2007
Title 980247T
Sample type genomic
 
Source name Breast Tumor
Organism Homo sapiens
Characteristics Tissue: Breast
Extracted molecule genomic DNA
Extraction protocol Qiagen DNA extraction kit was used according to the manufacturer's instructions.
Label biotinylated dideoxy ATP
Label protocol biotinylated dideoxy ATP is terminal deoxynucleotidyl transferased
 
Hybridization protocol Following Manufactruer's protocol
Scan protocol GeneChips were scanned using the Affymetrix GeneChip Scanner GCS3000
Description SNP profiling for breast tumors
Data processing The data were analyzed Dchip software for normalization and expression estimation
 
Submission date Sep 28, 2006
Last update date Feb 20, 2007
Contact name wei chen
E-mail(s) chenwei@agenica.com
Organization name Agenica Research Pte Ltd
Street address 11 Hospital Drive
City Singapore
ZIP/Postal code 169610
Country Singapore
 
Platform ID GPL2005
Series (1)
GSE5927 SNP expression data from breast cancer

Data table header descriptions
ID_REF
VALUE Dchip generated Signal intensity

Data table
ID_REF VALUE
SNP_A-1650338 8438.14
SNP_A-1716667 13179.9
SNP_A-1712945 4907.38
SNP_A-1711654 19386
SNP_A-1717655 3342.62
SNP_A-1659842 3766.85
SNP_A-1653742 4085.83
SNP_A-1686138 6388.09
SNP_A-1696456 1684.32
SNP_A-1706789 6944.49
SNP_A-1702159 4448.36
SNP_A-1717099 9418.91
SNP_A-1692956 3154.99
SNP_A-1693565 7430.93
SNP_A-1731109 10707.2
SNP_A-1642331 10535.4
SNP_A-1713287 2142.79
SNP_A-1749711 42729
SNP_A-1755148 5946.73
SNP_A-1741069 1278.38

Total number of rows: 58960

Table truncated, full table size 1258 Kbytes.




Supplementary data files not provided

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