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Sample GSM137722 Query DataSets for GSM137722
Status Public on Feb 20, 2007
Title 980338T
Sample type genomic
 
Source name Breast Tumor
Organism Homo sapiens
Characteristics Tissue: Breast
Extracted molecule genomic DNA
Extraction protocol Qiagen DNA extraction kit was used according to the manufacturer's instructions.
Label biotinylated dideoxy ATP
Label protocol biotinylated dideoxy ATP is terminal deoxynucleotidyl transferased
 
Hybridization protocol Following Manufactruer's protocol
Scan protocol GeneChips were scanned using the Affymetrix GeneChip Scanner GCS3000
Description SNP profiling for breast tumors
Data processing The data were analyzed Dchip software for normalization and expression estimation
 
Submission date Sep 28, 2006
Last update date Feb 20, 2007
Contact name wei chen
E-mail(s) chenwei@agenica.com
Organization name Agenica Research Pte Ltd
Street address 11 Hospital Drive
City Singapore
ZIP/Postal code 169610
Country Singapore
 
Platform ID GPL2005
Series (1)
GSE5927 SNP expression data from breast cancer

Data table header descriptions
ID_REF
VALUE Dchip generated Signal intensity

Data table
ID_REF VALUE
SNP_A-1650338 4333.65
SNP_A-1716667 8195.96
SNP_A-1712945 6365.46
SNP_A-1711654 16729.6
SNP_A-1717655 4472.82
SNP_A-1659842 6362.9
SNP_A-1653742 5874.86
SNP_A-1686138 831.097
SNP_A-1696456 3709.8
SNP_A-1706789 3370.68
SNP_A-1702159 7829.51
SNP_A-1717099 4157
SNP_A-1692956 2450.78
SNP_A-1693565 3339.64
SNP_A-1731109 8921.68
SNP_A-1642331 12665.3
SNP_A-1713287 5458.54
SNP_A-1749711 34050.4
SNP_A-1755148 5854.25
SNP_A-1741069 3335.36

Total number of rows: 58960

Table truncated, full table size 1258 Kbytes.




Supplementary data files not provided

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