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Sample GSM137728 Query DataSets for GSM137728
Status Public on Feb 20, 2007
Title 990113T
Sample type genomic
 
Source name Breast Tumor
Organism Homo sapiens
Characteristics Tissue: Breast
Extracted molecule genomic DNA
Extraction protocol Qiagen DNA extraction kit was used according to the manufacturer's instructions.
Label biotinylated dideoxy ATP
Label protocol biotinylated dideoxy ATP is terminal deoxynucleotidyl transferased
 
Hybridization protocol Following Manufactruer's protocol
Scan protocol GeneChips were scanned using the Affymetrix GeneChip Scanner GCS3000
Description SNP profiling for breast tumors
Data processing The data were analyzed Dchip software for normalization and expression estimation
 
Submission date Sep 28, 2006
Last update date Feb 20, 2007
Contact name wei chen
E-mail(s) chenwei@agenica.com
Organization name Agenica Research Pte Ltd
Street address 11 Hospital Drive
City Singapore
ZIP/Postal code 169610
Country Singapore
 
Platform ID GPL2005
Series (1)
GSE5927 SNP expression data from breast cancer

Data table header descriptions
ID_REF
VALUE Dchip generated Signal intensity

Data table
ID_REF VALUE
SNP_A-1650338 9203.05
SNP_A-1716667 15006.4
SNP_A-1712945 11038.1
SNP_A-1711654 14670.2
SNP_A-1717655 2697.21
SNP_A-1659842 5021.54
SNP_A-1653742 2235.81
SNP_A-1686138 603.518
SNP_A-1696456 2586.08
SNP_A-1706789 1850.34
SNP_A-1702159 16252.6
SNP_A-1717099 1105.24
SNP_A-1692956 203.491
SNP_A-1693565 2480.18
SNP_A-1731109 9256.16
SNP_A-1642331 13468
SNP_A-1713287 7551.81
SNP_A-1749711 36753.3
SNP_A-1755148 12861.5
SNP_A-1741069 2259.54

Total number of rows: 58960

Table truncated, full table size 1259 Kbytes.




Supplementary data files not provided

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