NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM137922 Query DataSets for GSM137922
Status Public on Sep 28, 2006
Title Colon - 174060
Sample type RNA
 
Source name Colon
Organism Homo sapiens
Extracted molecule total RNA
 
Description Quality metric = 28S to 18S: 1.2
Patient Age: 70-80
Gender: Female
Ethnic Background: Caucasian
Tobacco Use : No
Alcohol Consumption?: No
Family History of Cancer?: Yes
Days from Patient Diagnosis to Excision: 35
Screening studies performed?: No
Diagnosis made by: Colonoscopy
Pathological T: 2
Pathological N: 0
Pathological M: 0
Pathological Stage: 1
Pathological Grade: 2
Pathological Multiple Tumors: No
Pathological Stage During or Following Multimodality Therapy: No
Pathological Dukes Stage: A
Primary Site: Colon
Histology: Adenocarcinoma arising in a villous adenoma
 
Submission date Sep 28, 2006
Last update date Aug 28, 2018
Contact name Erin Curley
E-mail(s) ecurley@intgen.org
Phone 602-343-8808
Fax 602-343-8440
URL http://www.intgen.org
Organization name IGC
Department
Lab expO
Street address 445 N. 5th Street
City Phoenix
State/province AZ
ZIP/Postal code 85004
Country USA
 
Platform ID GPL570
Series (1)
GSE2109 Expression Project for Oncology (expO)
Relations
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF The name of the probe set, blank for control probes
VALUE The signal value calculated by MAS5, normalized
ABS_CALL The detection value calculated by the MAS5
DETECTION P-VALUE The detection p-value calculated by the MAS5

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 2554.1 P 0.000095
AFFX-BioB-M_at 4567.0 P 0.000044
AFFX-BioB-3_at 2446.8 P 0.000044
AFFX-BioC-5_at 7364.9 P 0.000044
AFFX-BioC-3_at 8004.0 P 0.000044
AFFX-BioDn-5_at 22602.9 P 0.000044
AFFX-BioDn-3_at 36575.4 P 0.000044
AFFX-CreX-5_at 84678.2 P 0.000052
AFFX-CreX-3_at 96089.0 P 0.000044
AFFX-DapX-5_at 6033.6 P 0.000044
AFFX-DapX-M_at 10609.1 P 0.000060
AFFX-DapX-3_at 16793.8 P 0.000044
AFFX-LysX-5_at 548.9 P 0.000070
AFFX-LysX-M_at 1155.7 P 0.000195
AFFX-LysX-3_at 1703.6 P 0.000044
AFFX-PheX-5_at 887.8 P 0.000044
AFFX-PheX-M_at 1173.9 P 0.000060
AFFX-PheX-3_at 1759.1 P 0.000052
AFFX-ThrX-5_at 2389.6 P 0.000070
AFFX-ThrX-M_at 3160.6 P 0.000044

Total number of rows: 54675

Table truncated, full table size 1477 Kbytes.




Supplementary file Size Download File type/resource
GSM137922.CEL.gz 7.9 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap