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Sample GSM15035 Query DataSets for GSM15035
Status Public on Jan 09, 2005
Title mouse testis SAMP1 (14 mo)
Sample type SAGE
Anchor RsaI
Tag Count 20719
Tag Length 14
 
Source name testis 14-month-old male SAMP1 mice
Organism Mus musculus
Extracted molecule total RNA
 
Description 5 male SAMP1 mice, aged 14 months, were used in the experiment. RNA from all five animals was pooled and used as input in the SAGE procedure.
Keywords = mouse
Keywords = testis
Keywords = aging
 
Submission date Jan 08, 2004
Last update date Nov 19, 2008
Contact name Junjie Yao
E-mail(s) yjunjie@sch.md.shinshu-u.ac.jp
Phone 0081-263-37-2692
Fax 0081-263-36-3662
URL http://dept.md.shinshu-u.ac.jp/i-byotai/
Organization name Shinshu university
Department Aging and Adaptation
Lab Aging Biology
Street address Asahi 3-1-1
City Matsumoto
State/province Nagano
ZIP/Postal code 390-8621
Country Japan
 
Platform ID GPL923
Series (1)
GSE950 Testes gene expression and aging

Data table header descriptions
TAG
COUNT Count
TPM tags per million
UNIGENE CLUSTER TITLE UniGene description
UNIGENE CLUSTER ID UniGene ID

Data table
TAG COUNT TPM UNIGENE CLUSTER TITLE UNIGENE CLUSTER ID
TGAGCAAAGCCACC 1280 61779.04 protamine 2 (Prm2), mRNA 541
CATGTCGACCAGCC 668 32240.94 transition protein 1 (Tnp1), mRNA 661
CGAGCAAATGCCAG 292 14093.34 poly A binding protein, cytoplasmic 1 2642
CCATGCCAGGCAAT 266 12838.46 RIKEN cDNA 1700113K14 gene 34166
CCCAGCCATCCCAT 247 11921.42 germ cell-specific gene 1 (Gsg1), mRNA 27148
CCACCAGGCAGCTC 236 11390.51 RIKEN cDNA 1810006K21 gene 140838
TGAGCGCATGGGTC 221 10666.54 tubulin alpha 7/3(Tuba7/3), mRNA
CCAAAGGAGAGGGC 205 9894.30 RIKEN cDNA 4930442L21 gene 46115
CAGGTCGCGAAGGG 130 6274.43 Mus musculus 8 days embryo whole body cDNA 34092
CAGGCAGTGACAGC 125 6033.11 Ribosomal protein L13a 13020
CTGGAGGACCCATG 124 5984.84 Chemokine-like factor 1 232618
CTAACGGCCGAGAT 121 5840.05 Histone gene complex 2 219659
CTACCGATGGCTGT 110 5309.14 RIKEN cDNA 1010001N11 gene 29939
CTGCCCAATTTGCC 90 4343.84 RIKEN cDNA 1700065B19 gene 45362
CATCACGGCCCATG 88 4247.31 Cytosolic 5' nucleotidase 1B 50897
CCTGCCTCCAGGTG 86 4150.78 EST Barstead mouse testis 139288
CCAGGCTCTATGGT 81 3909.46 casein kinase II, beta subunit (Csnk2b), mRNA 26789
CGGGAAAGAGACGT 80 3861.19 EST 45187
CAATGGCCTTCGAG 71 3426.81 Fatty acid Coenzyme A ligase, long chain 2 28962
CTGGCCACTGATGC 69 3330.28 Rho interacting protein 3 2402

Total number of rows: 8652

Table truncated, full table size 284 Kbytes.




Supplementary data files not provided

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