|
| Status |
Public on Sep 29, 2014 |
| Title |
129SvSL p53+/+ Male 3 months (liver)_40 |
| Sample type |
genomic |
| |
|
| Source name |
Liver
|
| Organism |
Mus musculus |
| Characteristics |
strain: 129SvSL
p53 status: p53+/+
developmental stage: adult
gender: Male
age: 3 months
tissue: liver
|
| Treatment protocol |
None
|
| Growth protocol |
Mice were grown according to standard conditions
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
DNA was extracted from adult liver or 17.5 day old embryo
|
| Label |
biotin
|
| Label protocol |
Performed by The Jackson Lab
|
| |
|
| Hybridization protocol |
Performed by The Jackson Lab
|
| Scan protocol |
Performed by The Jackson Lab
|
| Description |
sample40
hybridized to Mouse Diversity Genotype Array
|
| Data processing |
Genotyping performed by The Jackson Lab. PennCNV was used to determine Log R Ratio (LRR) and B Allele Frequency (BAF). MouseDivGeno 1.0.4 software was used to make SNPs calls.
|
| |
|
| Submission date |
Sep 23, 2014 |
| Last update date |
Oct 01, 2014 |
| Contact name |
SAURABH V LADDHA |
| E-mail(s) |
saurabhvladdha@gmail.com
|
| Organization name |
Rutgers Cancer Institute of New Jersey
|
| Department |
Center for Systems and Computational Biology
|
| Street address |
195 Little Albany Street
|
| City |
New Brunswick |
| State/province |
NEW JERSEY |
| ZIP/Postal code |
08901-1914 |
| Country |
USA |
| |
|
| Platform ID |
GPL13147 |
| Series (1) |
| GSE61660 |
Affymetrix Mouse Diversity Genotyping Array Data for p53 deficient mice |
|
