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Sample GSM1513643 Query DataSets for GSM1513643
Status Public on Sep 26, 2014
Title CD8+ T cells: healthy uninfected macaque biological rep 1
Sample type RNA
 
Source name Healthy uninfected macaque blood CD8+ T cells
Organism Macaca mulatta
Characteristics tissue: Blood
cell type: CD8+ T cells
Extracted molecule total RNA
Extraction protocol RNA was extracted with the Qiagen Rneasy kit according to the manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard protocols described in the Affymetrix Gene Expression Analysis Technical Manual
 
Hybridization protocol Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Rhesus macaque 3' IVT arrays. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
Scan protocol GeneChips were scanned using the Affymetrix GeneChip Scanner 3000
Description Gene expression data from healthy macaque blood CD8+ T cell
Data processing The data were analyzed with BRB Array Tools, version 4.3
 
Submission date Sep 25, 2014
Last update date Sep 26, 2014
Contact name Michael George
E-mail(s) mdgeorge@ucdavis.edu
Organization name University of California, Davis
Department Medical Microbiology and Immunology
Street address 451 Health Sciences Drive
City Davis
State/province CA
ZIP/Postal code 95616
Country USA
 
Platform ID GPL3535
Series (1)
GSE61766 Expression data from rhesus macaque blood CD8+ T cells

Data table header descriptions
ID_REF
VALUE BRB Array Tools expression values

Data table
ID_REF VALUE
AY588945.CDS1.S1_s_at 35.64767677
AY588945.CDS2.S1_s_at 5.89813119
AY588945.CDS3.S1_s_at 31.60959436
AY588945.CDS4.S1_s_at 4.93046995
AY588945.CDS6.S1_at 11.9062976
AY588945.CDS6.S1_s_at 16.66675876
AY588945.CDS7.S1_s_at 4.690173811
AY588945.CDS8.S1_at 11.6552132
AY588945.CDS9.S1_s_at 6.544155392
Mmu.10002.1.S1_at 74.57478051
Mmu.10002.1.S1_s_at 100.9603609
Mmu.10014.1.S1_at 2240.02107
Mmu.10025.1.S1_at 80.26797555
Mmu.10030.1.S1_at 1618.807147
Mmu.10039.1.S1_at 403.9175163
Mmu.10045.2.S1_at 320.9073642
Mmu.10045.2.S1_x_at 530.2630091
Mmu.10062.1.S1_s_at 14522.41229
Mmu.10083.1.A1_at 295.2798148
Mmu.10083.1.S1_s_at 100.8999131

Total number of rows: 52766

Table truncated, full table size 1722 Kbytes.




Supplementary file Size Download File type/resource
GSM1513643_0w_225_CD8.CEL.gz 3.9 Mb (ftp)(http) CEL
Processed data included within Sample table

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