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Sample GSM1513646 Query DataSets for GSM1513646
Status Public on Sep 26, 2014
Title CD8+ T cells: healthy uninfected macaque biological rep 4
Sample type RNA
 
Source name Healthy uninfected macaque blood CD8+ T cells
Organism Macaca mulatta
Characteristics tissue: Blood
cell type: CD8+ T cells
Extracted molecule total RNA
Extraction protocol RNA was extracted with the Qiagen Rneasy kit according to the manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard protocols described in the Affymetrix Gene Expression Analysis Technical Manual
 
Hybridization protocol Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Rhesus macaque 3' IVT arrays. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
Scan protocol GeneChips were scanned using the Affymetrix GeneChip Scanner 3000
Description Gene expression data from healthy macaque blood CD8+ T cell
Data processing The data were analyzed with BRB Array Tools, version 4.3
 
Submission date Sep 25, 2014
Last update date Sep 26, 2014
Contact name Michael George
E-mail(s) mdgeorge@ucdavis.edu
Organization name University of California, Davis
Department Medical Microbiology and Immunology
Street address 451 Health Sciences Drive
City Davis
State/province CA
ZIP/Postal code 95616
Country USA
 
Platform ID GPL3535
Series (1)
GSE61766 Expression data from rhesus macaque blood CD8+ T cells

Data table header descriptions
ID_REF
VALUE BRB Array Tools expression values

Data table
ID_REF VALUE
AY588945.CDS1.S1_s_at 35.59448683
AY588945.CDS2.S1_s_at 10.28066356
AY588945.CDS3.S1_s_at 29.40148264
AY588945.CDS4.S1_s_at 5.326581081
AY588945.CDS6.S1_at 13.07676227
AY588945.CDS6.S1_s_at 30.23339146
AY588945.CDS7.S1_s_at 6.712334186
AY588945.CDS8.S1_at 28.67240313
AY588945.CDS9.S1_s_at 7.556342419
Mmu.10002.1.S1_at 77.04494569
Mmu.10002.1.S1_s_at 253.4166909
Mmu.10014.1.S1_at 2569.636131
Mmu.10025.1.S1_at 65.72332542
Mmu.10030.1.S1_at 1664.097085
Mmu.10039.1.S1_at 401.9765207
Mmu.10045.2.S1_at 253.4536701
Mmu.10045.2.S1_x_at 346.3699685
Mmu.10062.1.S1_s_at 6445.147997
Mmu.10083.1.A1_at 181.3173332
Mmu.10083.1.S1_s_at 77.77457684

Total number of rows: 52766

Table truncated, full table size 1722 Kbytes.




Supplementary file Size Download File type/resource
GSM1513646_0w_256_CD8.CEL.gz 3.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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