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Sample GSM1513647 Query DataSets for GSM1513647
Status Public on Sep 26, 2014
Title CD8+ T cells: healthy uninfected macaque biological rep 5
Sample type RNA
 
Source name Healthy uninfected macaque blood CD8+ T cells
Organism Macaca mulatta
Characteristics tissue: Blood
cell type: CD8+ T cells
Extracted molecule total RNA
Extraction protocol RNA was extracted with the Qiagen Rneasy kit according to the manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard protocols described in the Affymetrix Gene Expression Analysis Technical Manual
 
Hybridization protocol Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Rhesus macaque 3' IVT arrays. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
Scan protocol GeneChips were scanned using the Affymetrix GeneChip Scanner 3000
Description Gene expression data from healthy macaque blood CD8+ T cell
Data processing The data were analyzed with BRB Array Tools, version 4.3
 
Submission date Sep 25, 2014
Last update date Sep 26, 2014
Contact name Michael George
E-mail(s) mdgeorge@ucdavis.edu
Organization name University of California, Davis
Department Medical Microbiology and Immunology
Street address 451 Health Sciences Drive
City Davis
State/province CA
ZIP/Postal code 95616
Country USA
 
Platform ID GPL3535
Series (1)
GSE61766 Expression data from rhesus macaque blood CD8+ T cells

Data table header descriptions
ID_REF
VALUE BRB Array Tools expression values

Data table
ID_REF VALUE
AY588945.CDS1.S1_s_at 56.72565653
AY588945.CDS2.S1_s_at 6.30142531
AY588945.CDS3.S1_s_at 41.43540205
AY588945.CDS4.S1_s_at 4.991425634
AY588945.CDS6.S1_at 18.74159906
AY588945.CDS6.S1_s_at 45.36202635
AY588945.CDS7.S1_s_at 5.772637059
AY588945.CDS8.S1_at 5.783637314
AY588945.CDS9.S1_s_at 6.467390161
Mmu.10002.1.S1_at 45.27628927
Mmu.10002.1.S1_s_at 128.078517
Mmu.10014.1.S1_at 1751.162656
Mmu.10025.1.S1_at 82.58545853
Mmu.10030.1.S1_at 934.3507062
Mmu.10039.1.S1_at 314.5402297
Mmu.10045.2.S1_at 100.9537658
Mmu.10045.2.S1_x_at 130.3221448
Mmu.10062.1.S1_s_at 5271.525325
Mmu.10083.1.A1_at 150.7852656
Mmu.10083.1.S1_s_at 18.64293498

Total number of rows: 52766

Table truncated, full table size 1722 Kbytes.




Supplementary file Size Download File type/resource
GSM1513647_0w_286_CD8.CEL.gz 3.6 Mb (ftp)(http) CEL
Processed data included within Sample table

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