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Sample GSM1513648 Query DataSets for GSM1513648
Status Public on Sep 26, 2014
Title CD8+ T cells: healthy uninfected macaque biological rep 6
Sample type RNA
 
Source name Healthy uninfected macaque blood CD8+ T cells
Organism Macaca mulatta
Characteristics tissue: Blood
cell type: CD8+ T cells
Extracted molecule total RNA
Extraction protocol RNA was extracted with the Qiagen Rneasy kit according to the manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard protocols described in the Affymetrix Gene Expression Analysis Technical Manual
 
Hybridization protocol Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Rhesus macaque 3' IVT arrays. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
Scan protocol GeneChips were scanned using the Affymetrix GeneChip Scanner 3000
Description Gene expression data from healthy macaque blood CD8+ T cell
Data processing The data were analyzed with BRB Array Tools, version 4.3
 
Submission date Sep 25, 2014
Last update date Sep 26, 2014
Contact name Michael George
E-mail(s) mdgeorge@ucdavis.edu
Organization name University of California, Davis
Department Medical Microbiology and Immunology
Street address 451 Health Sciences Drive
City Davis
State/province CA
ZIP/Postal code 95616
Country USA
 
Platform ID GPL3535
Series (1)
GSE61766 Expression data from rhesus macaque blood CD8+ T cells

Data table header descriptions
ID_REF
VALUE BRB Array Tools expression values

Data table
ID_REF VALUE
AY588945.CDS1.S1_s_at 41.06568129
AY588945.CDS2.S1_s_at 5.904811019
AY588945.CDS3.S1_s_at 17.29481329
AY588945.CDS4.S1_s_at 4.189234937
AY588945.CDS6.S1_at 9.619318703
AY588945.CDS6.S1_s_at 12.55277551
AY588945.CDS7.S1_s_at 5.48386226
AY588945.CDS8.S1_at 8.79048018
AY588945.CDS9.S1_s_at 4.450610496
Mmu.10002.1.S1_at 136.3704709
Mmu.10002.1.S1_s_at 154.0522032
Mmu.10014.1.S1_at 4358.701812
Mmu.10025.1.S1_at 270.0700716
Mmu.10030.1.S1_at 372.4442408
Mmu.10039.1.S1_at 1721.796867
Mmu.10045.2.S1_at 91.11923142
Mmu.10045.2.S1_x_at 75.05803568
Mmu.10062.1.S1_s_at 10619.98151
Mmu.10083.1.A1_at 253.9826043
Mmu.10083.1.S1_s_at 65.12727557

Total number of rows: 52766

Table truncated, full table size 1722 Kbytes.




Supplementary file Size Download File type/resource
GSM1513648_0w_290_CD8.CEL.gz 4.0 Mb (ftp)(http) CEL
Processed data included within Sample table

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