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Sample GSM1525193 Query DataSets for GSM1525193
Status Public on Jun 15, 2016
Title HT29_siREG4
Sample type RNA
 
Source name HT29, REG4 siRNA
Organism Homo sapiens
Characteristics cell line: HT29
treatment: siRNA targeting GATA6
Extracted molecule total RNA
Extraction protocol Total RNA was prepared using TRIsure (BIO LINE)
Label biotin
Label protocol Affymetrix protocol
 
Hybridization protocol Affymetrix protocol
Scan protocol Affymetrix protocol
Data processing Data sets were imported into Gene Spring for normalization and statistical analysis.
 
Submission date Oct 14, 2014
Last update date Jun 15, 2016
Contact name Testu Akiyama
Organization name Tokyo University
Department Institute of Molecular and Cellular Biosciences
Lab Laboratory of Molecular and Genetic Information
Street address 1-1-1, Yayoi, Bunkyo-ku
City Tokyo
ZIP/Postal code 110-0032
Country Japan
 
Platform ID GPL16686
Series (2)
GSE62318 Gene expression profiles of HT29 cells in which REG4 expression was suppressed.
GSE62319 HT29 and GATA6

Data table header descriptions
ID_REF
VALUE RMA signal estimates from Gene Spring

Data table
ID_REF VALUE
16657436 0.023343563
16657440 0.019869328
16657445 -0.030426025
16657447 0
16657450 0.18755245
16657469 0.38413286
16657473 -0.006347179
16657476 0.022192955
16657480 0.010330677
16657485 -0.005393505
16657489 0.06666899
16657492 -0.039114475
16657502 -0.11106348
16657506 0.02862978
16657509 0.023292065
16657514 0.04908657
16657527 0.039016247
16657529 0.09653282
16657534 -0.034341335
16657554 -0.025075912

Total number of rows: 44629

Table truncated, full table size 900 Kbytes.




Supplementary file Size Download File type/resource
GSM1525193_HT29_siREG4.CEL.gz 7.3 Mb (ftp)(http) CEL
Processed data included within Sample table
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