|
| Status |
Public on Feb 03, 2015 |
| Title |
LU-1790 [4823821006_I] |
| Sample type |
genomic |
| |
|
| Source name |
Lung
|
| Organism |
Homo sapiens |
| Characteristics |
gender: F
tumor or normal: T
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
genomic DNA was extracted and purified from lung tumor or adjacent normal tissues using Qiagen DNeasy Kit according to standard instructions
|
| Label |
Cy5 and Cy3
|
| Label protocol |
Standard Illumina Protocol
|
| |
|
| Hybridization protocol |
bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation27 Beadchip using standard Illumina protocol
|
| Scan protocol |
Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
|
| Data processing |
BeadStudio software v3.2
|
| |
|
| Submission date |
Nov 04, 2014 |
| Last update date |
Feb 03, 2015 |
| Contact name |
Zhifu Sun |
| Organization name |
Mayo Clinic
|
| Department |
HSR-BSI
|
| Street address |
200 1st ST SW
|
| City |
Rochester |
| State/province |
MN |
| ZIP/Postal code |
55905 |
| Country |
USA |
| |
|
| Platform ID |
GPL8490 |
| Series (2) |
| GSE62948 |
DNA Methylation and RNA Expression Profiles in Lung Adenocarcinomas [DNA methylation] |
| GSE62950 |
DNA Methylation and RNA Expression Profiles in Lung Adenocarcinomas |
|
