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Sample GSM154732 Query DataSets for GSM154732
Status Public on May 01, 2008
Title Centre Median Replicate 1
Sample type RNA
 
Source name Adult brain
Organism Macaca mulatta
Characteristics Material from adult monkey dorsal thalamus
Extracted molecule total RNA
Extraction protocol Triazol (Invitrogen, Carlsbad, CA) regent followed by RNeasy (Qiagen, Valencia, CA) lipid mini kit cleanup
Label biotin
Label protocol Affymetrix recomended labelling protocol was used.
 
Hybridization protocol Affymetrix recomended hybridization protocol was used.
Scan protocol U133A GeneChips were scanned using a Affymetrix GeneChip Scanner 7G according to the manufactureres instructions.
Description None
Data processing Raw values obtained from Affymetrix Cel files were preprocessed for RMA in GeneSpring GX (version 7.3.1) followed by per-gene and per-chip median polishing.
 
Submission date Jan 10, 2007
Last update date May 01, 2008
Contact name Karl Daniel Murray
E-mail(s) kdmurray@ucdavis.edu
Organization name UC Davis
Street address 1544 Newton Court
City Davis
State/province CA
ZIP/Postal code 95618
Country USA
 
Platform ID GPL96
Series (1)
GSE6708 Nucleus- and cell-specific gene expression in monkey thalamus

Data table header descriptions
ID_REF
VALUE RMA Preprocessed

Data table
ID_REF VALUE
AFFX-BioB-5_at 147.51993
AFFX-BioB-M_at 214.75652
AFFX-BioB-3_at 125.498825
AFFX-BioC-5_at 416.65598
AFFX-BioC-3_at 291.40335
AFFX-BioDn-5_at 443.10245
AFFX-BioDn-3_at 3607.84
AFFX-CreX-5_at 5048.016
AFFX-CreX-3_at 7373.4263
AFFX-DapX-5_at 19.431099
AFFX-DapX-M_at 16.832064
AFFX-DapX-3_at 19.012615
AFFX-LysX-5_at 15.176106
AFFX-LysX-M_at 36.22332
AFFX-LysX-3_at 17.451424
AFFX-PheX-5_at 20.38451
AFFX-PheX-M_at 19.144518
AFFX-PheX-3_at 74.16604
AFFX-ThrX-5_at 24.007784
AFFX-ThrX-M_at 23.77834

Total number of rows: 22283

Table truncated, full table size 448 Kbytes.




Supplementary file Size Download File type/resource
GSM154732.CEL.gz 3.6 Mb (ftp)(http) CEL

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