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Sample GSM154753 Query DataSets for GSM154753
Status Public on May 01, 2008
Title Ventral Thalamus Replicate 2
Sample type RNA
 
Source name Adult brain
Organism Macaca mulatta
Characteristics Material from adult monkey dorsal thalamus
Extracted molecule total RNA
Extraction protocol Triazol (Invitrogen, Carlsbad, CA) regent followed by RNeasy (Qiagen, Valencia, CA) lipid mini kit cleanup
Label biotin
Label protocol Affymetrix recomended labelling protocol was used.
 
Hybridization protocol Affymetrix recomended hybridization protocol was used.
Scan protocol U133A GeneChips were scanned using a Affymetrix GeneChip Scanner 7G according to the manufactureres instructions.
Description None
Data processing Raw values obtained from Affymetrix Cel files were preprocessed for RMA in GeneSpring GX (version 7.3.1) followed by per-gene and per-chip median polishing.
 
Submission date Jan 10, 2007
Last update date May 01, 2008
Contact name Karl Daniel Murray
E-mail(s) kdmurray@ucdavis.edu
Organization name UC Davis
Street address 1544 Newton Court
City Davis
State/province CA
ZIP/Postal code 95618
Country USA
 
Platform ID GPL96
Series (1)
GSE6708 Nucleus- and cell-specific gene expression in monkey thalamus

Data table header descriptions
ID_REF
VALUE RMA Preprocessed

Data table
ID_REF VALUE
AFFX-BioB-5_at 327.7764
AFFX-BioB-M_at 433.53763
AFFX-BioB-3_at 276.1344
AFFX-BioC-5_at 887.0027
AFFX-BioC-3_at 706.1467
AFFX-BioDn-5_at 2144.5803
AFFX-BioDn-3_at 4240.834
AFFX-CreX-5_at 8547.013
AFFX-CreX-3_at 12238.209
AFFX-DapX-5_at 17.382019
AFFX-DapX-M_at 14.239655
AFFX-DapX-3_at 19.623232
AFFX-LysX-5_at 13.793717
AFFX-LysX-M_at 31.57409
AFFX-LysX-3_at 15.57677
AFFX-PheX-5_at 18.325844
AFFX-PheX-M_at 17.332014
AFFX-PheX-3_at 62.74962
AFFX-ThrX-5_at 21.148853
AFFX-ThrX-M_at 16.18799

Total number of rows: 22283

Table truncated, full table size 448 Kbytes.




Supplementary file Size Download File type/resource
GSM154753.CEL.gz 3.0 Mb (ftp)(http) CEL

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