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Sample GSM15580 Query DataSets for GSM15580
Status Public on Jan 27, 2004
Title S6:2HG52HF3
Sample type RNA
 
Channel 1
Source name 2HG
Organism Rattus norvegicus
Extracted molecule total RNA
 
Channel 2
Source name 2HF
Organism Rattus norvegicus
Extracted molecule total RNA
 
 
Description The mRNA samples used in this experiment were extracted from 20-old rat small intestines perfused with HG and HF for 4 h.
 
Submission date Jan 21, 2004
Last update date May 28, 2005
Contact name Xuelin Cui
E-mail(s) xuelincui@yahoo.com
Phone 973-972-4519
Fax 973-972-7950
Organization name New Jersey Medical School-UMDNJ
Department Pharmacology and Physiology
Street address 185 S. Orange Ave.
City Newark
State/province NJ
ZIP/Postal code 07103
Country USA
 
Platform ID GPL958
Series (1)
GSE996 rat small intestine samples

Data table header descriptions
ID_REF
F635_MEDIAN Density of Cy5
F532_MEDIAN Density of Cy3
B635_MEDIAN Density of Background of Cy5
B532_MEDIAN Density of Background of Cy3
A =LOG((Cy5+Cy3),2)
M =LOG(Cy5/Cy3,2)
NOM_M_0_3 M value with 30% smoother
VALUE M value with 40% smoother

Data table
ID_REF F635_MEDIAN F532_MEDIAN B635_MEDIAN B532_MEDIAN A M NOM_M_0_3 VALUE
1 1261 1624 81 94 10.48284424 -0.364983357 -0.294606839 -0.299712351
2 607 856 80 90 9.493509846 -0.49591428 -0.126228631 -0.184341034
3 394 641 82 88 8.973116183 -0.702128727 -0.250987694 -0.240562024
4 3606 5022 85 93 12.055115 -0.477862632 -0.580408559 -0.562612159
5 2587 5008 87 95 11.81354159 -0.952954508 -1.115041697 -1.065683094
6 1645 2142 84 92 10.87430732 -0.380870896 -0.457272644 -0.459542958
7 486 803 87 96 9.287034341 -0.724443674 -0.233130522 -0.263747745
8 479 1359 100 113 9.656105793 -1.504447895 -1.300040807 -1.281665278
9 1310 2023 100 123 10.66881585 -0.626929508 -0.596671326 -0.606352295
10 12522 14014 104 127 13.69337928 -0.162403795 -0.038480925 -0.041886256
11 1210 1898 106 128 10.5655278 -0.649472945 -0.588898207 -0.595193543
12 17079 20430 153 159 14.18916873 -0.258465699 -0.071530953 -0.06785476
13 5708 8180 81 101 12.73832737 -0.519115508 -0.479243036 -0.505743862
14 5122 1640 86 94 11.50098582 1.643011438 1.295517665 1.386139464
15 5462 564 83 90 10.77738248 3.275662246 3.121199541 3.120159303
16 5162 1033 84 95 11.17316948 2.321089887 2.000623206 2.019540263
17 544 726 94 99 9.29564429 -0.416362897 0.062871342 0.034045275
18 791 1720 97 102 10.18786337 -1.120658965 -0.957891206 -0.998312286
19 1272 3194 99 106 10.97701578 -1.328265642 -1.408832648 -1.430825125
20 1004 1081 100 128 10.02484718 -0.106607254 -0.004855431 0.007689848

Total number of rows: 4952

Table truncated, full table size 337 Kbytes.




Supplementary data files not provided
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