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Sample GSM15687 Query DataSets for GSM15687
Status Public on Jan 27, 2004
Title CurrentSmoker 12
Sample type RNA
 
Source name Bronchial Epithelia
Organism Homo sapiens
Characteristics tissue: Bronchial Epithelium
Extracted molecule total RNA
Extraction protocol RNA was extracted by using TRIzol Reagent (Invitrogen) according to the manufacturer's protocol
Label protocol Affymetrix Suggested Protocol
 
Hybridization protocol Affymetrix Suggested Protocol
Scan protocol Affymetrix Suggested Protocol
Description Volunteer patients underwent bronchoscopy from which RNA was extracted using a commercial RNA extraction kit. Targets were produced using standard Affymetrix procedures from about 8ug of total RNA.
Keywords = Homo Sapiens, bronchial epithelia, molecular screen for smoking related changes to transcript levels in bronchial epithelia
Data processing MAS5.0 Scaled 100 generated expression value
 
Submission date Jan 24, 2004
Last update date Aug 18, 2014
Contact name Avrum Spira
E-mail(s) aspira@bu.edu
Phone 617-638-4860
Fax 617-536-8093
URL http://www.pulmonomics.com
Organization name Boston University Medical Center
Department Pulmonary and Critical Care Medicine
Lab Pulmonomics Lab
Street address 715 Albany Street, R304
City Boston
State/province MA
ZIP/Postal code 02118
Country USA
 
Platform ID GPL96
Series (1)
GSE994 Effects of cigarette smoke on the human airway epithelial cell transcriptome
Relations
Reanalyzed by GSE60486

Data table header descriptions
ID_REF Affymetrix Probeset ID
VALUE MAS5.0 Scaled 100 generated expression value
DETECTION P-VALUE P-Value that indicates the significance level of the detection call

Data table
ID_REF VALUE DETECTION P-VALUE
1007_s_at 1058.100 0.000673
1053_at 52.400 0.438361
117_at 19.400 0.715253
121_at 333.100 0.031336
1255_g_at 38.500 0.267463
1294_at 358.300 0.000805
1316_at 114.400 0.081337
1320_at 14.300 0.602006
1405_i_at 63.600 0.437646
1431_at 25.900 0.378184
1438_at 13.200 0.933135
1487_at 325.400 0.081337
1494_f_at 198.100 0.024711
1598_g_at 309.200 0.013092
160020_at 142.900 0.107301
1729_at 177.700 0.004863
1773_at 110.900 0.358690
177_at 89.300 0.438361
179_at 354.000 0.039365
1861_at 91.700 0.397994

Total number of rows: 22215

Table truncated, full table size 587 Kbytes.




Supplementary file Size Download File type/resource
GSM15687.CEL.gz 2.8 Mb (ftp)(http) CEL

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