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Sample GSM1585812 Query DataSets for GSM1585812
Status Public on Oct 01, 2015
Title Barrett's esophagus stem cells from patient 2, rep2
Sample type RNA
 
Source name Barrett's esophagus stem cells_patient 2
Organism Homo sapiens
Characteristics patient id: patient 2
cell type: Barett's esophagus stem cells
sample type: Cultured stem cells
Extracted molecule total RNA
Extraction protocol PicoPure® RNA Isolation Kit (Life Technologies)
Label Biotin
Label protocol Encore® Biotin Module (Nugen)
 
Hybridization protocol GeneChip® Hybridization, Wash, and Stain Kit (affymetrix)
Scan protocol GeneChip® Hybridization, Wash, and Stain Kit (affymetrix)
Description BE2-2
Data processing Expression console, Partek Genome Suite 6.6
probe group file: HuEx-1_0-st-v2.r2.pgf
meta-probeset file: HuEx-1_0-st-v2.r2.dt1.hg18.core.mps
 
Submission date Jan 15, 2015
Last update date Oct 01, 2015
Contact name Frank McKeon
E-mail(s) mckeon.xian@gmail.com
Phone 8608372486
Organization name University of Houston
Department Biology and Biochemistry
Street address 3455 Cullen Blvd
City Houston
State/province TX
ZIP/Postal code 77004
Country USA
 
Platform ID GPL5175
Series (1)
GSE65013 Cell cloning of Barrett's esophagus stem cell, gastric cardia stem cells and normal esophagus stem cells

Data table header descriptions
ID_REF
VALUE signal intensity (log2 value) RMA

Data table
ID_REF VALUE
3881686 6.97903
2672712 7.09262
2842570 6.57434
3526544 3.90627
2902531 5.32865
2402942 8.27958
3382216 5.19111
3771800 7.55082
2427469 3.87367
2392945 6.65298
2453006 10.2242
3552083 5.43188
3416651 4.1961
2562821 8.80358
3721851 6.69516
3442176 6.19589
2477438 5.31065
2926969 3.33524
3026969 7.09961
3796335 5.94487

Total number of rows: 22011

Table truncated, full table size 341 Kbytes.




Supplementary file Size Download File type/resource
GSM1585812_BE2-2.CEL.gz 21.1 Mb (ftp)(http) CEL
Processed data included within Sample table

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