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Sample GSM1585819 Query DataSets for GSM1585819
Status Public on Oct 01, 2015
Title Barrett's esophagus stem cells from patient 6, rep1
Sample type RNA
 
Source name Barrett's esophagus stem cells_patient 6
Organism Homo sapiens
Characteristics patient id: patient 6
cell type: Barett's esophagus stem cells
sample type: Cultured stem cells
Extracted molecule total RNA
Extraction protocol PicoPure® RNA Isolation Kit (Life Technologies)
Label Biotin
Label protocol Encore® Biotin Module (Nugen)
 
Hybridization protocol GeneChip® Hybridization, Wash, and Stain Kit (affymetrix)
Scan protocol GeneChip® Hybridization, Wash, and Stain Kit (affymetrix)
Description BE6-1
Data processing Expression console, Partek Genome Suite 6.6
probe group file: HuEx-1_0-st-v2.r2.pgf
meta-probeset file: HuEx-1_0-st-v2.r2.dt1.hg18.core.mps
 
Submission date Jan 15, 2015
Last update date Oct 01, 2015
Contact name Frank McKeon
E-mail(s) mckeon.xian@gmail.com
Phone 8608372486
Organization name University of Houston
Department Biology and Biochemistry
Street address 3455 Cullen Blvd
City Houston
State/province TX
ZIP/Postal code 77004
Country USA
 
Platform ID GPL5175
Series (1)
GSE65013 Cell cloning of Barrett's esophagus stem cell, gastric cardia stem cells and normal esophagus stem cells

Data table header descriptions
ID_REF
VALUE signal intensity (log2 value) RMA

Data table
ID_REF VALUE
3881686 7.32629
2672712 7.02806
2842570 6.99825
3526544 3.9839
2902531 4.67074
2402942 7.52306
3382216 5.83752
3771800 7.68336
2427469 6.07634
2392945 6.93283
2453006 9.66365
3552083 4.50794
3416651 3.60932
2562821 8.89257
3721851 7.02816
3442176 6.26652
2477438 4.81094
2926969 3.22196
3026969 6.97806
3796335 6.27745

Total number of rows: 22011

Table truncated, full table size 341 Kbytes.




Supplementary file Size Download File type/resource
GSM1585819_BE6-1.CEL.gz 20.0 Mb (ftp)(http) CEL
Processed data included within Sample table

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