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Sample GSM1585821 Query DataSets for GSM1585821
Status Public on Oct 01, 2015
Title Barrett's esophagus stem cells from patient 7, rep1
Sample type RNA
 
Source name Barrett's esophagus stem cells_patient 7
Organism Homo sapiens
Characteristics patient id: patient 7
cell type: Barett's esophagus stem cells
sample type: Cultured stem cells
Extracted molecule total RNA
Extraction protocol PicoPure® RNA Isolation Kit (Life Technologies)
Label Biotin
Label protocol Encore® Biotin Module (Nugen)
 
Hybridization protocol GeneChip® Hybridization, Wash, and Stain Kit (affymetrix)
Scan protocol GeneChip® Hybridization, Wash, and Stain Kit (affymetrix)
Description BE7-1
Data processing Expression console, Partek Genome Suite 6.6
probe group file: HuEx-1_0-st-v2.r2.pgf
meta-probeset file: HuEx-1_0-st-v2.r2.dt1.hg18.core.mps
 
Submission date Jan 15, 2015
Last update date Oct 01, 2015
Contact name Frank McKeon
E-mail(s) mckeon.xian@gmail.com
Phone 8608372486
Organization name University of Houston
Department Biology and Biochemistry
Street address 3455 Cullen Blvd
City Houston
State/province TX
ZIP/Postal code 77004
Country USA
 
Platform ID GPL5175
Series (1)
GSE65013 Cell cloning of Barrett's esophagus stem cell, gastric cardia stem cells and normal esophagus stem cells

Data table header descriptions
ID_REF
VALUE signal intensity (log2 value) RMA

Data table
ID_REF VALUE
3881686 6.7296
2672712 6.8759
2842570 6.83434
3526544 3.92402
2902531 5.15409
2402942 7.95889
3382216 6.26948
3771800 7.98655
2427469 4.40098
2392945 6.62622
2453006 6.87313
3552083 5.45831
3416651 4.02198
2562821 8.31285
3721851 6.44565
3442176 5.84401
2477438 5.16633
2926969 3.49117
3026969 7.2633
3796335 6.0089

Total number of rows: 22011

Table truncated, full table size 341 Kbytes.




Supplementary file Size Download File type/resource
GSM1585821_BE7-1.CEL.gz 19.8 Mb (ftp)(http) CEL
Processed data included within Sample table

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