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Sample GSM160346 Query DataSets for GSM160346
Status Public on Jan 01, 2008
Title Prostate tumor patient 4 (HG-U133A 2.0 Array)
Sample type RNA
Source name Adenocarcinoma (NOS) of the prostate
Organism Homo sapiens
Characteristics race: Caucasian
smoking status: Past
gleason sum: 7
pt stage: 2
extraprostatic extension: None
perineural invasion: Yes
seminal vesicle invasion: No
are surgical margins involved: Tumor focal at margin
angio lymphatic invasion: No
Extracted molecule total RNA
Extraction protocol TRIzol
Label biotin
Label protocol Standard Affy protocol
Hybridization protocol Standard Affy protocol
Scan protocol Standard Affy protocol
Description Race: Caucasian, Smoking Status: Past, Gleason Sum: 7, PT Stage: 2, Extraprostatic Extension: None, Perineural Invasion: Yes, Seminal vesicle invasion: No, Are Surgical margins involved: Tumor focal at margin, Angio lymphatic invasion: No
Data processing MAS5
Submission date Feb 05, 2007
Last update date Apr 16, 2015
Contact name Robert Scott Hudson
Organization name NIH
Department NCI
Lab The Laboratory of Human Carcinogenesis
Street address National Cancer Institute Room Blgd.37/3044
City Bethesda
State/province MD
ZIP/Postal code 20852
Country USA
Platform ID GPL571
Series (2)
GSE6956 Tumor Immunobiological Differences in Prostate Cancer between African-American and European-American Men
GSE7055 Expression of microRNAs and Protein-coding Genes Associated with Perineural Invasion in Prostate Cancer

Data table header descriptions
VALUE MAS5-calculated Signal intensity
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)

Data table
1007_s_at 2019.311827 P
1053_at 179.3592198 P
117_at 99.09385482 P
121_at 442.8559743 P
1255_g_at 19.23691506 A
1294_at 581.3185516 P
1316_at 60.12043579 P
1320_at 50.7772512 A
1405_i_at 581.8399763 P
1431_at 72.12191908 P
1438_at 260.0872224 P
1487_at 346.6364137 P
1494_f_at 78.13744751 P
1598_g_at 1851.644333 P
160020_at 321.7323093 P
1729_at 686.63195 P
1773_at 152.1432584 P
177_at 52.42207452 P
179_at 320.6903191 M
1861_at 239.9542308 P

Total number of rows: 22277

Table truncated, full table size 540 Kbytes.

Supplementary file Size Download File type/resource
GSM160346.CEL.gz 2.2 Mb (ftp)(http) CEL
Processed data included within Sample table

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