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GEO help: Mouse over screen elements for information. |
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Status |
Public on Feb 14, 2007 |
Title |
SKNMC_shCTL_rep1 |
Sample type |
RNA |
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Source name |
Ewing SK-N-MC cell line
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Organism |
Homo sapiens |
Characteristics |
Ewing cell line
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Growth protocol |
Treated with scramble (control) shRNA lentivirus for 3 days
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Extracted molecule |
total RNA |
Extraction protocol |
Total RNAs were isolated using the Trizol Reagent
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Label |
biotin
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Label protocol |
According to Affymetrix Gene-Chip expression analysis technical manual, Affymetrix, Santa Clara, Calif.
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Hybridization protocol |
According to Affymetrix Gene-Chip expression analysis technical manual, Affymetrix, Santa Clara, Calif.
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Scan protocol |
According to Affymetrix Gene-Chip expression analysis technical manual, Affymetrix, Santa Clara, Calif.
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Description |
Ewing SK-N-MC cell line treated with scramble (control) shRNA lentivirus for 3 days
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Data processing |
MAS5
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Submission date |
Feb 10, 2007 |
Last update date |
Sep 01, 2016 |
Contact name |
Olivier Delattre |
E-mail(s) |
olivier.delattre@curie.fr
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Phone |
33142346681
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Fax |
33142646630
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Organization name |
Institut Curie
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Department |
Genetics
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Lab |
U830
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Street address |
26 rue d'Ulm
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City |
Paris |
ZIP/Postal code |
75248 cedex 05 |
Country |
France |
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Platform ID |
GPL96 |
Series (1) |
GSE7007 |
Ewing samples and EWS-FLI-1 inhibited Ewing cell lines |
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Relations |
Reanalyzed by |
GSE86363 |
Data table header descriptions |
ID_REF |
|
VALUE |
VALUE |
ABS_CALL |
ABS_CALL |
DETECTION-P-VALUE |
DETECTION-P-VALUE |
Data table |
ID_REF |
VALUE |
ABS_CALL |
DETECTION-P-VALUE |
AFFX-BioB-5_at |
39.9261 |
P |
0.0151826 |
AFFX-BioB-M_at |
62.2735 |
P |
0.000662269 |
AFFX-BioB-3_at |
35.6508 |
P |
0.0012475 |
AFFX-BioC-5_at |
129.898 |
P |
0.00010954 |
AFFX-BioC-3_at |
111.076 |
P |
6.02111e-05 |
AFFX-BioDn-5_at |
271.331 |
P |
7.00668e-05 |
AFFX-BioDn-3_at |
703.171 |
P |
0.000224668 |
AFFX-CreX-5_at |
1187 |
P |
4.42873e-05 |
AFFX-CreX-3_at |
1768.13 |
P |
4.42873e-05 |
AFFX-DapX-5_at |
4.76644 |
A |
0.275146 |
AFFX-DapX-M_at |
8.00039 |
A |
0.147939 |
AFFX-DapX-3_at |
0.868391 |
A |
0.921998 |
AFFX-LysX-5_at |
0.481313 |
A |
0.9273 |
AFFX-LysX-M_at |
8.31162 |
A |
0.39692 |
AFFX-LysX-3_at |
5.44984 |
A |
0.300606 |
AFFX-PheX-5_at |
0.897099 |
A |
0.9273 |
AFFX-PheX-M_at |
0.876763 |
A |
0.910522 |
AFFX-PheX-3_at |
11.6657 |
A |
0.470241 |
AFFX-ThrX-5_at |
1.64381 |
A |
0.749204 |
AFFX-ThrX-M_at |
5.04845 |
A |
0.52976 |
Total number of rows: 22283
Table truncated, full table size 673 Kbytes.
Supplementary file |
Size |
Download |
File type/resource |
GSM161543.CEL.gz |
3.5 Mb |
(ftp)(http) |
CEL |
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