|
|
GEO help: Mouse over screen elements for information. |
|
Status |
Public on Feb 14, 2007 |
Title |
SKNMC_shCTL_rep2 |
Sample type |
RNA |
|
|
Source name |
Ewing SK-N-MC cell line
|
Organism |
Homo sapiens |
Characteristics |
Ewing cell line
|
Growth protocol |
Treated with scramble (control) shRNA lentivirus for 3 days
|
Extracted molecule |
total RNA |
Extraction protocol |
Total RNAs were isolated using the Trizol Reagent
|
Label |
biotin
|
Label protocol |
According to Affymetrix Gene-Chip expression analysis technical manual, Affymetrix, Santa Clara, Calif.
|
|
|
Hybridization protocol |
According to Affymetrix Gene-Chip expression analysis technical manual, Affymetrix, Santa Clara, Calif.
|
Scan protocol |
According to Affymetrix Gene-Chip expression analysis technical manual, Affymetrix, Santa Clara, Calif.
|
Description |
Ewing SK-N-MC cell line treated with scramble (control) shRNA lentivirus for 3 days
|
Data processing |
MAS5
|
|
|
Submission date |
Feb 10, 2007 |
Last update date |
Sep 01, 2016 |
Contact name |
Olivier Delattre |
E-mail(s) |
olivier.delattre@curie.fr
|
Phone |
33142346681
|
Fax |
33142646630
|
Organization name |
Institut Curie
|
Department |
Genetics
|
Lab |
U830
|
Street address |
26 rue d'Ulm
|
City |
Paris |
ZIP/Postal code |
75248 cedex 05 |
Country |
France |
|
|
Platform ID |
GPL96 |
Series (1) |
GSE7007 |
Ewing samples and EWS-FLI-1 inhibited Ewing cell lines |
|
Relations |
Reanalyzed by |
GSE86363 |
Data table header descriptions |
ID_REF |
|
VALUE |
VALUE |
ABS_CALL |
ABS_CALL |
DETECTION-P-VALUE |
DETECTION-P-VALUE |
Data table |
ID_REF |
VALUE |
ABS_CALL |
DETECTION-P-VALUE |
AFFX-BioB-5_at |
27.8628 |
P |
0.0113844 |
AFFX-BioB-M_at |
47.2496 |
P |
0.00110197 |
AFFX-BioB-3_at |
36.5935 |
P |
0.0138105 |
AFFX-BioC-5_at |
121.668 |
P |
0.000146581 |
AFFX-BioC-3_at |
100.294 |
P |
4.42873e-05 |
AFFX-BioDn-5_at |
256.541 |
P |
0.00010954 |
AFFX-BioDn-3_at |
643.279 |
P |
0.000340305 |
AFFX-CreX-5_at |
1293.63 |
P |
4.42873e-05 |
AFFX-CreX-3_at |
1815.6 |
P |
4.42873e-05 |
AFFX-DapX-5_at |
5.8311 |
A |
0.185131 |
AFFX-DapX-M_at |
7.47685 |
A |
0.195266 |
AFFX-DapX-3_at |
0.576974 |
A |
0.876428 |
AFFX-LysX-5_at |
0.595854 |
A |
0.804734 |
AFFX-LysX-M_at |
7.83743 |
A |
0.313723 |
AFFX-LysX-3_at |
2.25053 |
A |
0.645547 |
AFFX-PheX-5_at |
1.1985 |
A |
0.897835 |
AFFX-PheX-M_at |
1.16242 |
A |
0.824672 |
AFFX-PheX-3_at |
12.6167 |
A |
0.287743 |
AFFX-ThrX-5_at |
0.893862 |
A |
0.737173 |
AFFX-ThrX-M_at |
2.99188 |
A |
0.631562 |
Total number of rows: 22283
Table truncated, full table size 673 Kbytes.
Supplementary file |
Size |
Download |
File type/resource |
GSM161544.CEL.gz |
3.6 Mb |
(ftp)(http) |
CEL |
|
|
|
|
|