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Sample GSM1672869 Query DataSets for GSM1672869
Status Public on May 03, 2017
Title NO_890
Sample type RNA
 
Source name de novo acute myeloid leukemia
Organism Homo sapiens
Characteristics npm1 mutation status: wild type
disease: AML
tissue: bone marrow
Extracted molecule total RNA
Extraction protocol RNA was extracted by TriZol reagent according to manufacturer's instructions.
Label miRNA-specific probes
Label protocol Labeling was performed according to manufacturer's instructions (NanoString Technologies).
 
Hybridization protocol Hybridization processes were performed according to manufacturer's instructions (NanoString Technologies).
Scan protocol Arrays were scanned by nCounter Analysis system according to manufacturer's instructions (NanoString Technologies).
Data processing Intensities were processed and normalized by using the nSolver™ Analysis Software following manufacturer's instructions (NanoString Technologies).
 
Submission date May 01, 2015
Last update date May 03, 2017
Contact name Wen-Chien Chou
E-mail(s) wchou@ntu.edu.tw
Organization name National Taiwan University Hospital
Department Department of Laboratory Medicine
Street address No. 7, Chung-Shan S. Rd.
City Taipei
ZIP/Postal code 10002
Country Taiwan
 
Platform ID GPL17904
Series (2)
GSE68467 NPM1 mutation-modulated microRNA−mRNA regulation in acute myeloid leukemia [miRNA]
GSE68469 NPM1 mutation-modulated microRNA-mRNA regulation in acute myeloid leukemia

Data table header descriptions
ID_REF
VALUE Normalized read count of miRNA

Data table
ID_REF VALUE
hsa-let-7a-5p 14107.9
hsa-let-7b-5p 5316.79
hsa-let-7c 511.26
hsa-let-7d-5p 356.92
hsa-let-7e-5p 389.07
hsa-let-7f-5p 2546.66
hsa-let-7g-5p 15146.49
hsa-let-7i-5p 836.02
hsa-miR-1 3.22
hsa-miR-100-5p 1.61
hsa-miR-101-3p 14.47
hsa-miR-103a-3p 9.65
hsa-miR-105-5p 14.47
hsa-miR-106a-5p+hsa-miR-17-5p 7180.16
hsa-miR-106b-5p 1906.78
hsa-miR-107 813.52
hsa-miR-10a-5p 1001.62
hsa-miR-10b-5p 8.04
hsa-miR-1178 3.22
hsa-miR-1179 16.08

Total number of rows: 822

Table truncated, full table size 15 Kbytes.




Supplementary file Size Download File type/resource
GSM1672869_20121018_205551770614_879-890_12.RCC.gz 6.8 Kb (ftp)(http) RCC
Processed data included within Sample table

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