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Status
Public on Jul 22, 2002
Title
Undifferentiated P19 embryonic carcinoma (EC) cells
Sample type
SAGE
Anchor
NlaIII
Tag Count
64952
Tag Length
10
Source name
Undifferentiated P19 EC cells
Organism
Mus musculus
Extracted molecule
total RNA
Description
SAGE identification of differentiation responsive genes in P19 embryonic cells induced to form cardiomyocytes in vitro. Undifferentiated P19 embryonic carcinoma (EC) cells. Total number of 65,677 SAGE tags sequenced. 64,952 SAGE tags analyzed after clean-up (extraction of poly(A) tags, linker-generated tags, and tags originated from clones producing 4 tags or less). Keywords = EC cells, P19, undifferentiated
Submission date
May 23, 2002
Last update date
Nov 19, 2008
Contact name
Kenneth R. Boheler
E-mail(s)
bohelerk@grc.nia.nih.gov
Phone
410-558-8189
Fax
410-558-8150
URL
http://www.grc.nia.nih.gov/branches/lcs/mcu.htm
Organization name
National Institute on Aging, NIH
Department
GRC
Lab
Laboratory of Cardiovascular Science
Street address
5600 Nathan Shock Drive
City
Baltimore
State/province
MD
ZIP/Postal code
21224
Country
USA
Platform ID
GPL11
Series (1)
GSE42
P19 embryonic carcinoma (EC) cells induced to form cardiomyocytes in vitro
Data table header descriptions
TAG
Undifferentiated P19 EC cells
COUNT
Cleaned-up
TPM
tags per million
Data table
TAG
COUNT
TPM
AAAAAAAAAC
1
15.40
AAAAAAACGG
1
15.40
AAAAAAAGAG
1
15.40
AAAAAACTGA
1
15.40
AAAAAAGAAA
1
15.40
AAAAAAGACT
1
15.40
AAAAAAGTCA
1
15.40
AAAAAATAAA
2
30.79
AAAAAATCAT
1
15.40
AAAAAATTAT
1
15.40
AAAAAATTGA
1
15.40
AAAAACAATC
1
15.40
AAAAACAGGA
1
15.40
AAAAACAGTG
22
338.71
AAAAACCACC
1
15.40
AAAAACCATC
1
15.40
AAAAACGCTC
1
15.40
AAAAACTCTA
3
46.19
AAAAAGACCC
1
15.40
AAAAAGACTC
3
46.19
Total number of rows: 22804 Table truncated, full table size 425 Kbytes .Supplementary data files not provided