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Sample GSM16892 Query DataSets for GSM16892
Status Public on Nov 13, 2004
Title Human Glomerular Endothelial Cell
Sample type SAGE
Anchor NlaIII
Tag Count 68987
Tag Length 10
 
Source name Human glomeruli
Organism Homo sapiens
Extracted molecule total RNA
 
Description Tissue from macroscopically healthy parts of nephrectomized kidneys. Endothelial cells were purified from the cell outgrowth of glomeruli twice using CD31 magnetic beads and cultured on fibronectin coated surface. Cells were not passaged more than eight times and stained with vWf, CD31, and after stimulation with TNF alpha also with CD62E/P.
Protocol according to MicroSAGE adaptation of Velculescu, V. E., Zhang,
L.,Vogelstein, B., and Kinzler, K. W. (1995) Serial
Analysis of Gene Expression. Science 270, 484-487.
Anchor enzyme: NlaIII.
 
Submission date Feb 13, 2004
Last update date Nov 19, 2008
Contact name Gürkan Sengoelge
E-mail(s) guerkan.sengoelge@meduniwien.ac.at
Phone ++43-1-40400-2125
Fax ++43-1-40400-4392
Organization name Medical University Vienna
Department Medicine/Division of Nephrology
Street address Waehringer Guertel 18-20
City Vienna
ZIP/Postal code A-1090
Country Austria
 
Platform ID GPL4
Series (1)
GSE25760 SAGE analysis of human glomerular endothelial cell

Data table header descriptions
TAG Transcript sequence tag
COUNT Absolute number in the library
TPM tags per million

Data table
TAG COUNT TPM
TGCAGTCACT 564 8175.45
GGGCTGGGGT 529 7668.11
CTAGCCTCAC 482 6986.82
TGTGTTGAGA 434 6291.04
CGCCGACGAT 425 6160.58
CGCCGCCGGC 413 5986.64
TTGGTCCTCT 407 5899.66
GCCCCCAATA 386 5595.26
TTGGTGAAGG 375 5435.81
GCCGTGTCCG 367 5319.84
GGCTGGGGGC 355 5145.90
GCAGCCATCC 345 5000.94
GCACAGGCCA 319 4624.06
CCCATCGTCC 317 4595.07
TAGGTTGTCT 307 4450.11
TTCTGCTCTT 297 4305.16
GGCAAGCCCC 277 4015.25
GTGCACTGAG 253 3667.36
TTGGGGTTTC 250 3623.87
GAAGCAGGAC 246 3565.89

Total number of rows: 18385

Table truncated, full table size 343 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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