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Sample GSM1716451 Query DataSets for GSM1716451
Status Public on Jun 20, 2015
Title green-00155: NZB_mammary_tumor_mix-A-05-29-02
Sample type RNA
 
Source name Mouse mammary tumor
Organism Mus musculus
Characteristics disease_state: Mouse mammary tumor
strain: FVB/Nj
developmental_stage: Adult
Sex: female
age(days): 90
organism_part: Mouse mammary gland
Extracted molecule total RNA
Extraction protocol See mage-tab files linked to series entry for additional details
Label biotin
Label protocol See mage-tab files linked to series entry for additional details
 
Hybridization protocol See mage-tab files linked to series entry for additional details
Scan protocol See mage-tab files linked to series entry for additional details
Data processing See mage-tab files linked to series entry for additional details
 
Submission date Jun 19, 2015
Last update date Jun 20, 2015
Contact name Mervi Heiskanen
E-mail(s) mervi.heiskanen@nih.gov
Phone 2402765175
Organization name NCI
Department CBIIT
Street address 9609 Medical Center Drive, 1W378
City Rockville
State/province MD
ZIP/Postal code 20850
Country USA
 
Platform ID GPL81
Series (1)
GSE70052 caArray_green-00155: Global expression profiling identifies signatures of tumor virulence in MMTV-PyMT-transgenic mice

Data table header descriptions
ID_REF
VALUE Signal
ABS_CALL indicating whether the transcript was present (P), absent (A), or marginal (M)
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-MurIL2_at 6.85376 A 0.891021
AFFX-MurIL10_at 3.55256 A 0.631562
AFFX-MurIL4_at 14.0571 A 0.156732
AFFX-MurFAS_at 35.7687 A 0.0629293
AFFX-BioB-5_at 105.962 M 0.0429619
AFFX-BioB-M_at 109.281 P 0.0012475
AFFX-BioB-3_at 70.7993 P 0.0239288
AFFX-BioC-5_at 267.574 P 0.000224668
AFFX-BioC-3_at 168.248 P 0.000126798
AFFX-BioDn-5_at 222.489 P 0.000389797
AFFX-BioDn-3_at 1294.47 P 0.000581214
AFFX-CreX-5_at 2183.01 P 9.4506e-05
AFFX-CreX-3_at 3726.53 P 4.42873e-05
AFFX-BioB-5_st 22.6245 A 0.083592
AFFX-BioB-M_st 39.6581 A 0.544587
AFFX-BioB-3_st 11.5364 A 0.760937
AFFX-BioC-5_st 6.8266 A 0.860518
AFFX-BioC-3_st 3.20382 A 0.814869
AFFX-BioDn-5_st 60.895 A 0.139482
AFFX-BioDn-3_st 42.3574 A 0.175328

Total number of rows: 12488

Table truncated, full table size 364 Kbytes.




Supplementary file Size Download File type/resource
GSM1716451_NZB_mammary_tumor_mix-A-05-29-02.CEL.gz 2.9 Mb (ftp)(http) CEL
GSM1716451_NZB_mammary_tumor_mix-A-05-29-02.CHP.gz 5.0 Mb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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