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Sample GSM172464 Query DataSets for GSM172464
Status Public on Jul 02, 2007
Title Developmental regulation of the transcriptome of chicken retinal pigment epithelium (E7, replicate 4)
Sample type RNA
 
Source name Retinal Pigment Epithelium
Organism Gallus gallus
Characteristics from chicken embryos on embryoinic day 7 (E7)
Extracted molecule total RNA
Extraction protocol RNeasy Protect kit (Qiagen)
Label biotin-UTP
Label protocol affymetrix 3'-amplification ivt
 
Hybridization protocol Affymetrix standard protocol
Scan protocol Affymetrix standard protocol
Description E7, replicate 4
Data processing signal value generated from global scaling
 
Submission date Feb 28, 2007
Last update date Jul 02, 2007
Contact name Lawrence J Rizzolo
E-mail(s) lawrence.rizzolo@yale.edu
Organization name Yale University
Department Dept of Surgery
Street address 333 Cedar St
City New Haven
State/province CT
ZIP/Postal code 06511
Country USA
 
Platform ID GPL3213
Series (1)
GSE7176 Develomental Time Course of the Retinal Pigment Epithelial Transcriptome

Data table header descriptions
ID_REF
VALUE Singal
ABS_CALL Detection
DETECTION P-VALUE Detection p-value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 390.202 P 0.000662269
AFFX-BioB-M_at 516.505 P 6.02111e-05
AFFX-BioB-3_at 294.049 P 0.0032123
AFFX-BioC-5_at 1118.25 P 7.00668e-05
AFFX-BioC-3_at 1028.69 P 5.16732e-05
AFFX-BioDn-5_at 2473.5 P 4.42873e-05
AFFX-BioDn-3_at 5772.4 P 0.000126798
AFFX-CreX-5_at 13077.5 P 5.16732e-05
AFFX-CreX-3_at 16903.8 P 4.42873e-05
AFFX-DapX-5_at 10.594 A 0.51489
AFFX-DapX-M_at 85.8551 A 0.327079
AFFX-DapX-3_at 26.8261 A 0.672921
AFFX-LysX-5_at 41.4381 A 0.139482
AFFX-LysX-M_at 20.5625 A 0.814869
AFFX-LysX-3_at 16.2135 A 0.455413
AFFX-PheX-5_at 2.89707 A 0.843268
AFFX-PheX-M_at 4.5157 A 0.953518
AFFX-PheX-3_at 79.3903 A 0.382599
AFFX-ThrX-5_at 14.4146 A 0.760937
AFFX-ThrX-M_at 33.4291 A 0.544587

Total number of rows: 38535

Table truncated, full table size 1486 Kbytes.




Supplementary file Size Download File type/resource
GSM172464.CEL.gz 3.7 Mb (ftp)(http) CEL
GSM172464.EXP.gz 344 b (ftp)(http) EXP
Processed data included within Sample table

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