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Sample GSM1744 Query DataSets for GSM1744
Status Public on Jun 07, 2002
Title CF-1 transgenic 2mo ovary
Sample type RNA
 
Source name LHCTP transgenic ovary from 2 month old CF-1 mouse
Organism Mus musculus
Extracted molecule total RNA
 
Description Transgenic (LHCTP), cystic ovary sample from 2 month old CF-1 mouse for use in gene expression profiling experiment on LH hypersecreting mice (LHCTP)
 
Submission date Jun 05, 2002
Last update date Mar 17, 2006
Contact name John H Nilson
E-mail(s) jhn@po.cwru.edu
Phone 216-368-4497
Organization name Case Western Reserve University, School of Medicine
Department Pharmacology
Lab Nilson
Street address 2109 Adelbert Road
City Cleveland
State/province OH
ZIP/Postal code 44106
Country USA
 
Platform ID GPL75
Series (1)
GSE499 Granulosa cell tumorigenesis

Data table header descriptions
ID_REF
Positive positive probe pair
Negative negative probe pair
Pairs pairs
Pairs Used pairs used
Pairs InAvg pairs used in average
Pos Fraction positive probe pairs/total probe pairs
Log Avg log average ratio
Pos/Neg pos/neg
VALUE average difference
ABS_CALL present or absent or marginal

Data table
ID_REF Positive Negative Pairs Pairs Used Pairs InAvg Pos Fraction Log Avg Pos/Neg VALUE ABS_CALL
IL2_at 4 5 19 19 18 0.21 0.59 0.8 -149.3 A
IL10_at 9 6 20 20 17 0.45 0.57 1.5 133.3 A
GMCSF_at 5 8 20 20 18 0.25 -0.38 0.6 -460.3 A
TNFRII_at 7 2 20 20 18 0.35 0.88 3.5 95.2 A
MIP1-B_at 12 3 20 20 18 0.6 1.16 4 362.1 P
IL4_at 7 4 20 20 19 0.35 0.6 1.8 100.5 A
IL12_P40_at 5 7 20 20 19 0.25 -0.05 0.7 -315.5 A
TNFa_at 9 3 20 20 20 0.45 0.57 3 -95.6 A
TCRa_at 2 10 20 20 19 0.1 -2.23 0.2 -825.3 A
AFFX-BioB-5_at 9 6 20 20 18 0.45 1.12 1.5 627.4 A
AFFX-BioB-M_at 12 3 20 20 18 0.6 2.1 4 708.8 P
AFFX-BioB-3_at 10 3 20 20 20 0.5 1.77 3.3 1198.6 P
AFFX-BioC-5_at 18 0 20 20 19 0.9 5.43 Undef 3917.7 P
AFFX-BioC-3_at 17 0 20 20 20 0.85 4.6 Undef 4637.4 P
AFFX-BioDn-5_at 17 1 20 20 19 0.85 5.41 17 3107.5 P
AFFX-BioDn-3_at 18 0 20 20 20 0.9 5.7 Undef 12638.7 P
AFFX-CreX-5_at 19 0 20 20 20 0.95 8.17 Undef 24231.8 P
AFFX-CreX-3_at 19 0 20 20 20 0.95 7.07 Undef 24676.8 P
AFFX-BioB-5_st 9 5 20 20 19 0.45 0.69 1.8 390.1 A
AFFX-BioB-M_st 5 6 20 20 18 0.25 0.29 0.8 -117.8 A

Total number of rows: 6584

Table truncated, full table size 309 Kbytes.




Supplementary data files not provided
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