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Sample GSM1745 Query DataSets for GSM1745
Status Public on Jun 07, 2002
Title CF1 transgenic 2mo ovary B
Sample type RNA
 
Source name Transgenic (LHCTP) ovary from 2 month old CF-1 mouse chip B
Organism Mus musculus
Extracted molecule total RNA
 
Description Transgenic (LHCTP), cystic ovary sample from 2 month old CF-1 mouse for use in gene expression profiling experiment on LH hypersecreting mice (LHCTP)
 
Submission date Jun 05, 2002
Last update date Mar 17, 2006
Contact name John H Nilson
E-mail(s) jhn@po.cwru.edu
Phone 216-368-4497
Organization name Case Western Reserve University, School of Medicine
Department Pharmacology
Lab Nilson
Street address 2109 Adelbert Road
City Cleveland
State/province OH
ZIP/Postal code 44106
Country USA
 
Platform ID GPL76
Series (1)
GSE499 Granulosa cell tumorigenesis

Data table header descriptions
ID_REF
Positive positive probe pair
Negative negative probe pair
Pairs pairs
Pairs Used pairs used
Pairs InAvg pairs used in average
Pos Fraction positive probe pairs/total probe pairs
Log Avg log average ratio
Pos/Neg pos/neg
VALUE average difference
ABS_CALL present or absent or marginal

Data table
ID_REF Positive Negative Pairs Pairs Used Pairs InAvg Pos Fraction Log Avg Pos/Neg VALUE ABS_CALL
IL2_at 4 5 19 19 17 0.21 -0.22 0.8 -73.1 A
IL10_at 5 7 20 20 18 0.25 0.4 0.7 171.2 A
GMCSF_at 7 8 20 20 18 0.35 0.47 0.9 13.4 A
TNFRII_at 6 3 20 20 18 0.3 0.26 2 3 A
MIP1-B_at 9 3 20 20 18 0.45 0.84 3 247.8 A
IL4_at 5 4 20 20 18 0.25 1.02 1.3 46.6 A
IL12_P40_at 4 8 20 20 18 0.2 0.05 0.5 -153.4 A
TNFa_at 5 4 20 20 20 0.25 0.58 1.3 -23.2 A
TCRa_at 4 9 20 20 19 0.2 -1.09 0.4 -398.7 A
AFFX-BioB-5_at 12 3 20 20 19 0.6 2.17 4 567.1 P
AFFX-BioB-M_at 12 2 20 20 17 0.6 3.61 6 683.2 P
AFFX-BioB-3_at 11 3 20 20 20 0.55 1.52 3.7 686.2 P
AFFX-BioC-5_at 16 0 20 20 19 0.8 5.08 Undef 2064.9 P
AFFX-BioC-3_at 16 0 20 20 20 0.8 3.7 Undef 2137 P
AFFX-BioDn-5_at 17 1 20 20 20 0.85 4.69 17 2056.1 P
AFFX-BioDn-3_at 16 1 20 20 19 0.8 4.87 16 7275.4 P
AFFX-CreX-5_at 19 0 20 20 20 0.95 7.59 Undef 19446.6 P
AFFX-CreX-3_at 20 0 20 20 20 1 7.35 Undef 20615.2 P
AFFX-BioB-5_st 8 5 20 20 18 0.4 1.03 1.6 159.6 A
AFFX-BioB-M_st 4 8 20 20 19 0.2 -0.24 0.5 -105 A

Total number of rows: 6595

Table truncated, full table size 318 Kbytes.




Supplementary data files not provided
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