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Sample GSM1754 Query DataSets for GSM1754
Status Public on Jun 07, 2002
Title CF/B6 transgenic 2mo ovary
Sample type RNA
 
Source name Transgenic (LHCTP) ovary from 2 month old CF-1xC57BL/6 F1 hybrid mouse
Organism Mus musculus
Extracted molecule total RNA
 
Description Transgenic, cystic ovary sample from 2 month old CF-1xC57BL/6 F1 hybrid mouse for use in gene expression profiling experiment on LH hypersecreting mice (LHCTP)
 
Submission date Jun 05, 2002
Last update date Mar 21, 2006
Contact name John H Nilson
E-mail(s) jhn@po.cwru.edu
Phone 216-368-4497
Organization name Case Western Reserve University, School of Medicine
Department Pharmacology
Lab Nilson
Street address 2109 Adelbert Road
City Cleveland
State/province OH
ZIP/Postal code 44106
Country USA
 
Platform ID GPL75
Series (1)
GSE499 Granulosa cell tumorigenesis

Data table header descriptions
ID_REF
Positive positive probe pair
Negative negative probe pair
Pairs pairs
Pairs Used pairs used
Pairs InAvg pairs used in average
Pos Fraction positive probe pairs/total probe pairs
Log Avg log average ratio
Pos/Neg pos/neg
VALUE average difference
ABS_CALL present or absent or marginal

Data table
ID_REF Positive Negative Pairs Pairs Used Pairs InAvg Pos Fraction Log Avg Pos/Neg VALUE ABS_CALL
IL2_at 4 4 19 19 18 0.21 0.18 1 -227.4 A
IL10_at 7 5 20 20 18 0.35 1.52 1.4 260.2 A
GMCSF_at 4 6 20 20 18 0.2 -0.58 0.7 -353.6 A
TNFRII_at 6 3 20 20 18 0.3 0.54 2 80.3 A
MIP1-B_at 7 5 20 20 18 0.35 0.65 1.4 204.1 A
IL4_at 3 3 20 20 18 0.15 -0.19 1 -2.5 A
IL12_P40_at 3 7 20 20 18 0.15 0.49 0.4 -37.4 A
TNFa_at 4 3 20 20 19 0.2 0.27 1.3 4.3 A
TCRa_at 4 8 20 20 18 0.2 -1.01 0.5 -300 A
AFFX-BioB-5_at 11 2 20 20 19 0.55 1.94 5.5 582.7 P
AFFX-BioB-M_at 12 2 20 20 17 0.6 2.83 6 642.4 P
AFFX-BioB-3_at 9 1 20 20 19 0.45 1.8 9 858.9 P
AFFX-BioC-5_at 16 0 20 20 19 0.8 4.78 Undef 2257.1 P
AFFX-BioC-3_at 17 1 20 20 20 0.85 4.03 17 2828.3 P
AFFX-BioDn-5_at 16 2 20 20 20 0.8 4.58 8 2243.4 P
AFFX-BioDn-3_at 16 2 20 20 19 0.8 4.91 8 8315 P
AFFX-CreX-5_at 19 0 20 20 20 0.95 7.84 Undef 20541.4 P
AFFX-CreX-3_at 19 0 20 20 20 0.95 7.18 Undef 23418.1 P
AFFX-BioB-5_st 7 5 20 20 18 0.35 0.41 1.4 279.2 A
AFFX-BioB-M_st 5 7 20 20 19 0.25 -0.19 0.7 -160.2 A

Total number of rows: 6584

Table truncated, full table size 308 Kbytes.




Supplementary data files not provided
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