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Sample GSM1755425 Query DataSets for GSM1755425
Status Public on Sep 14, 2015
Title Agaricus bisporus fruitbody (diseased) Farm 2 rep2 (flush 1)
Sample type RNA
 
Source name fruitbody (diseased)
Organism Agaricus bisporus
Characteristics strain: A15
sample type: carrying a viral infection related to farm 2
Extracted molecule total RNA
Extraction protocol Total RNA isolated by the TRIZOL extraction method (Chomczynski, 1993) and purified and concentrated using the Qiagen RNEasy MinElute method
Label Cy3
Label protocol One-Colour Microarray-based Gene Expression Analysis protocol v.5.5 (Agilent Technologies).
 
Hybridization protocol Agilent standard protocols
Scan protocol Agilent Technologies Scanner G2505B US45102900
Data processing Feature Extraction software v.9.5.3 (Agilent).
 
Submission date Jul 01, 2015
Last update date Sep 15, 2015
Contact name KERRY STEVEN BURTON
Organization name EAST MALLING RESEARCH
Street address NEW ROAD, EAST MALLING
City MAIDSTONE
ZIP/Postal code ME19 6BJ
Country United Kingdom
 
Platform ID GPL20649
Series (1)
GSE70464 Gene expression changes with viral infection in Agaricus bisporus

Data table header descriptions
ID_REF
VALUE gProcessed Signal

Data table
ID_REF VALUE
1 9.17E+02
2 9.32E+01
3 8.74E+01
5 1.00E+02
6 1.95E+02
7 1.66E+02
8 1.16E+02
10 9.18E+01
11 1.26E+02
12 5.29E+03
14 1.03E+02
15 1.15E+03
16 1.53E+02
17 1.07E+02
18 3.14E+02
19 1.81E+03
20 2.54E+02
21 1.06E+02
22 9.98E+01
26 9.12E+01

Total number of rows: 11521

Table truncated, full table size 160 Kbytes.




Supplementary file Size Download File type/resource
GSM1755425_F5-8.txt.gz 1.3 Mb (ftp)(http) TXT
Processed data included within Sample table

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