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Sample GSM175560 Query DataSets for GSM175560
Status Public on Aug 15, 2007
Title PfWT vs CTRP CARC 2
Sample type RNA
 
Channel 1
Source name Pf WT infected A. gambiae carcass at 24 hours rep 2
Organism Anopheles gambiae
Characteristics Pf WT infected A. gambiae carcass at 24 hours rep 2
Extracted molecule total RNA
Extraction protocol QIAGEN
Label Cy5
Label protocol AGILENT
 
Channel 2
Source name Pf CTRP infected A. gambiae carcass at 24 hours
Organism Anopheles gambiae
Characteristics Pf CTRP infected A. gambiae carcass at 24 hours
Extracted molecule total RNA
Extraction protocol QIAGEN
Label Cy3
Label protocol AGILENT
 
 
Hybridization protocol AGILENT
Scan protocol AXON
Description AGILENT
Data processing GENEPIX
 
Submission date Mar 15, 2007
Last update date Aug 15, 2007
Contact name George Dimopoulos
E-mail(s) gdimopo1@jhu.edu
Phone 443 28 70128
Organization name Johns Hopkins School of Public Health
Department Molecular Microbiology and Immunology
Street address 615 N. Wolfe Street
City Baltimore
State/province MD
ZIP/Postal code 21205
Country USA
 
Platform ID GPL5001
Series (1)
GSE8789 Anopheles gambiae immune responses to human and rodent Plasmodium parasite species

Data table header descriptions
ID_REF
F635 Median F635 Median
B635 Median B635 Median
F635 % Sat. F635 % Sat.
F532 Median F532 Median
B532 Median B532 Median
F532 % Sat. F532 % Sat.
VALUE RATIO OF MEDIANS (635/532); not normalized
F Pixels F Pixels
Flags Flags

Data table
ID_REF F635 Median B635 Median F635 % Sat. F532 Median B532 Median F532 % Sat. VALUE F Pixels Flags
AG1 19 8 0 9 6 0 3.667 120 0
AG2 76 8 0 59 7 0 1.308 156 0
AG3 5807 10 0 6226 8 0 0.932 120 0
AG4 10 8 0 7 7 0 120 0
AG5 151 9 0 179 7 0 0.826 120 0
AG6 65 8 0 10 7 0 19 156 0
AG7 76 9 0 8 7 0 67 80 0
AG8 42 9 0 11 8 0 11 120 0
AG9 229 9 0 230 9 0 0.995 120 0
AG10 145 9 0 141 7 0 1.015 156 0
AG11 52 9 0 53 8 0 0.956 120 0
AG12 23 8 0 10 6 0 3.75 156 0
AG13 30 8 0 7 7 0 120 0
AG14 147 9 0 160 7 0 0.902 120 0
AG15 484 8 0 440 7 0 1.099 120 0
AG16 11 8 0 7 6 0 3 120 0
AG17 94 8 0 27 7 0 4.3 156 0
AG18 102 8 0 63 7 0 1.679 156 0
AG19 140 9 0 141 7 0 0.978 120 0
AG20 61 9 0 11 7 0 13 120 0

Total number of rows: 15295

Table truncated, full table size 500 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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