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Sample GSM1757 Query DataSets for GSM1757
Status Public on Jun 07, 2002
Title CF/B6 wild type 5mo ovary B
Sample type RNA
 
Source name Wild type ovary from 5 month old CF-1xC57BL/6 F1 hybrid mouse
Organism Mus musculus
Extracted molecule total RNA
 
Description Wild type ovary sample from 5 month old CF-1xC57BL/6 F1 hybrid mouse for use in gene expression profiling experiment on LH hypersecreting mice (LHCTP)
 
Submission date Jun 05, 2002
Last update date Mar 17, 2006
Contact name John H Nilson
E-mail(s) jhn@po.cwru.edu
Phone 216-368-4497
Organization name Case Western Reserve University, School of Medicine
Department Pharmacology
Lab Nilson
Street address 2109 Adelbert Road
City Cleveland
State/province OH
ZIP/Postal code 44106
Country USA
 
Platform ID GPL76
Series (1)
GSE499 Granulosa cell tumorigenesis

Data table header descriptions
ID_REF
Positive positive probe pair
Negative negative probe pair
Pairs pairs
Pairs Used pairs used
Pairs InAvg pairs used in average
Pos Fraction positive probe pairs/total probe pairs
Log Avg log average ratio
Pos/Neg pos/neg
VALUE average difference
ABS_CALL present or absent or marginal

Data table
ID_REF Positive Negative Pairs Pairs Used Pairs InAvg Pos Fraction Log Avg Pos/Neg VALUE ABS_CALL
IL2_at 6 3 19 19 17 0.32 0.05 2 -64.7 A
IL10_at 8 5 20 20 17 0.4 1.38 1.6 180.8 A
GMCSF_at 4 4 20 20 19 0.2 0.34 1 -90.9 A
TNFRII_at 8 2 20 20 18 0.4 1.12 4 177.2 P
MIP1-B_at 8 3 20 20 19 0.4 0.67 2.7 730.3 A
IL4_at 5 4 20 20 18 0.25 1.13 1.3 55.3 A
IL12_P40_at 6 6 20 20 18 0.3 0.85 1 -104.2 A
TNFa_at 4 4 20 20 20 0.2 -0.4 1 -77.2 A
TCRa_at 3 8 20 20 20 0.15 -1.25 0.4 -608.2 A
AFFX-BioB-5_at 10 6 20 20 19 0.5 1.03 1.7 437.6 A
AFFX-BioB-M_at 9 3 20 20 17 0.45 2.25 3 563 P
AFFX-BioB-3_at 8 2 20 20 20 0.4 1.32 4 639.5 P
AFFX-BioC-5_at 15 0 20 20 19 0.75 4.12 Undef 1966 P
AFFX-BioC-3_at 16 1 20 20 20 0.8 3.54 16 2168.4 P
AFFX-BioDn-5_at 16 1 20 20 20 0.8 3.63 16 2006.1 P
AFFX-BioDn-3_at 15 2 20 20 19 0.75 4.55 7.5 6639.7 P
AFFX-CreX-5_at 19 0 20 20 20 0.95 7.45 Undef 19193.2 P
AFFX-CreX-3_at 19 0 20 20 20 0.95 7.04 Undef 22215.7 P
AFFX-BioB-5_st 7 5 20 20 20 0.35 0.82 1.4 216.7 A
AFFX-BioB-M_st 6 5 20 20 19 0.3 0.55 1.2 -28 A

Total number of rows: 6595

Table truncated, full table size 319 Kbytes.




Supplementary data files not provided
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