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Sample GSM175775 Query DataSets for GSM175775
Status Public on Apr 09, 2007
Title Endometrium/Ovary-Disease 10
Sample type RNA
 
Source name Female - caucasian - E-08-G
Organism Homo sapiens
Characteristics Endometrium/Ovary-Disease 10
Treatment protocol Not treated
Growth protocol None
Extracted molecule total RNA
Extraction protocol Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
 
Hybridization protocol Following fragmentation, cRNA were hybridized for 16 hr at 45C on the GeneChip Human U133 plus 2.0 array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
Scan protocol GeneChips were scanned using the Affymetrix GeneChip Scanner 3009
Description Menstrual phase - Follicular
Data processing The data were analyzed with robust multi-array (RMA) for background correction, normalization and polishing.
 
Submission date Mar 19, 2007
Last update date Aug 28, 2018
Contact name Richard B Roth
E-mail(s) rroth@neurocrine.com
Organization name Neurocrine Biosciences, Inc.
Department Molecular Medicine
Street address 12790 El Camino Real
City San Diego
State/province CA
ZIP/Postal code 92130
Country USA
 
Platform ID GPL570
Series (1)
GSE7305 Human endometriosis vs normal endometrium study - transcriptional profiling
Relations
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE RMA-calculated Signal intensity

Data table
ID_REF VALUE
1554096_a_at 20.110075
235618_at 56.77867
226481_at 169.58247
203075_at 373.27203
236658_at 50.048187
212621_at 101.05154
1557720_s_at 27.491781
242882_at 43.830387
238622_at 34.48815
1566288_at 15.3229
223862_at 66.47919
227982_at 80.55428
235483_at 73.01307
1566114_at 22.391981
204150_at 328.808
201484_at 189.07263
212061_at 131.69246
210092_at 272.63315
205145_s_at 89.64759
221594_at 35.110134

Total number of rows: 54675

Table truncated, full table size 1092 Kbytes.




Supplementary file Size Download File type/resource
GSM175775.CEL.gz 4.4 Mb (ftp)(http) CEL

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