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Sample GSM1758 Query DataSets for GSM1758
Status Public on Jun 07, 2002
Title CF/B6 transgenic 5mo ovary (luteoma)
Sample type RNA
 
Source name Transgenic (LHCTP), luteoma ovary from 5 month old CF-1xC57BL/6 F1 hybrid mouse
Organism Mus musculus
Extracted molecule total RNA
 
Description Transgenic (LHCTP), luteoma ovary sample from 5 month old CF-1xC57BL/6 F1 hybrid mouse for use in gene expression profiling experiment on LH hypersecreting mice (LHCTP)
 
Submission date Jun 05, 2002
Last update date Mar 21, 2006
Contact name John H Nilson
E-mail(s) jhn@po.cwru.edu
Phone 216-368-4497
Organization name Case Western Reserve University, School of Medicine
Department Pharmacology
Lab Nilson
Street address 2109 Adelbert Road
City Cleveland
State/province OH
ZIP/Postal code 44106
Country USA
 
Platform ID GPL75
Series (1)
GSE499 Granulosa cell tumorigenesis

Data table header descriptions
ID_REF
Positive positive probe pair
Negative negative probe pair
Pairs pairs
Pairs Used pairs used
Pairs InAvg pairs used in average
Pos Fraction positive probe pairs/total probe pairs
Log Avg log average ratio
Pos/Neg pos/neg
VALUE average difference
ABS_CALL present or absent or marginal

Data table
ID_REF Positive Negative Pairs Pairs Used Pairs InAvg Pos Fraction Log Avg Pos/Neg VALUE ABS_CALL
IL2_at 6 10 19 19 19 0.32 -1.17 0.6 -279.8 A
IL10_at 8 7 20 20 19 0.4 0.89 1.1 127.6 A
GMCSF_at 5 8 20 20 18 0.25 -0.71 0.6 -325.6 A
TNFRII_at 9 3 20 20 18 0.45 1.33 3 122.2 P
MIP1-B_at 10 3 20 20 18 0.5 1.04 3.3 425.6 M
IL4_at 10 3 20 20 18 0.5 1.79 3.3 72.9 P
IL12_P40_at 6 7 20 20 17 0.3 0.14 0.9 -131.6 A
TNFa_at 8 6 20 20 19 0.4 1.63 1.3 3.1 A
TCRa_at 3 11 20 20 19 0.15 -1.56 0.3 -630 A
AFFX-BioB-5_at 10 5 20 20 19 0.5 1.53 2 351 A
AFFX-BioB-M_at 12 2 20 20 18 0.6 2.83 6 412.6 P
AFFX-BioB-3_at 10 3 20 20 19 0.5 2.05 3.3 543.1 P
AFFX-BioC-5_at 17 1 20 20 19 0.85 6.45 17 2577.7 P
AFFX-BioC-3_at 18 0 20 20 20 0.9 5.01 Undef 3019.6 P
AFFX-BioDn-5_at 17 1 20 20 18 0.85 6.6 17 2588.3 P
AFFX-BioDn-3_at 16 2 20 20 18 0.8 5.73 8 8665.8 P
AFFX-CreX-5_at 17 0 20 17 17 1 8.8 Undef 18739.6 P
AFFX-CreX-3_at 16 0 20 16 16 1 8.91 Undef 20026.2 P
AFFX-BioB-5_st 7 6 20 20 19 0.35 0.83 1.2 513.1 A
AFFX-BioB-M_st 6 6 20 20 18 0.3 -0.01 1 -333.5 A

Total number of rows: 6584

Table truncated, full table size 309 Kbytes.




Supplementary data files not provided
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