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Sample GSM1759 Query DataSets for GSM1759
Status Public on Jun 07, 2002
Title CF/B6 transgenic 5mo ovary (luteoma) B
Sample type RNA
 
Source name Transgenic (LHCTP), luteoma ovary from 5 month old CF-1xC57BL/6 F1 hybrid mouse
Organism Mus musculus
Extracted molecule total RNA
 
Description Transgenic (LHCTP), luteoma ovary sample from 5 month old CF-1xC57BL/6 F1 hybrid mouse for use in gene expression profiling experiment on LH hypersecreting mice (LHCTP)
 
Submission date Jun 05, 2002
Last update date Mar 17, 2006
Contact name John H Nilson
E-mail(s) jhn@po.cwru.edu
Phone 216-368-4497
Organization name Case Western Reserve University, School of Medicine
Department Pharmacology
Lab Nilson
Street address 2109 Adelbert Road
City Cleveland
State/province OH
ZIP/Postal code 44106
Country USA
 
Platform ID GPL76
Series (1)
GSE499 Granulosa cell tumorigenesis

Data table header descriptions
ID_REF
Positive positive probe pair
Negative negative probe pair
Pairs pairs
Pairs Used pairs used
Pairs InAvg pairs used in average
Pos Fraction positive probe pairs/total probe pairs
Log Avg log average ratio
Pos/Neg pos/neg
VALUE average difference
ABS_CALL present or absent or marginal

Data table
ID_REF Positive Negative Pairs Pairs Used Pairs InAvg Pos Fraction Log Avg Pos/Neg VALUE ABS_CALL
IL2_at 5 6 19 19 18 0.26 -0.14 0.8 -331.1 A
IL10_at 9 6 20 20 19 0.45 2.01 1.5 178.4 A
GMCSF_at 6 8 20 20 19 0.3 -0.29 0.8 -660.6 A
TNFRII_at 10 3 20 20 18 0.5 1.76 3.3 184.6 P
MIP1-B_at 10 3 20 20 18 0.5 1.44 3.3 625.7 P
IL4_at 9 4 20 20 18 0.45 2.48 2.3 86.1 A
IL12_P40_at 6 7 20 20 18 0.3 0.79 0.9 -15.5 A
TNFa_at 7 5 20 20 20 0.35 -0.07 1.4 -120.3 A
TCRa_at 3 11 20 20 19 0.15 -1.45 0.3 -839.2 A
AFFX-BioB-5_at 13 6 20 20 19 0.65 2.77 2.2 495.4 A
AFFX-BioB-M_at 12 1 20 20 18 0.6 3.48 12 462.2 P
AFFX-BioB-3_at 11 2 20 20 19 0.55 2.06 5.5 557.3 P
AFFX-BioC-5_at 17 1 20 20 19 0.85 5.32 17 1902.4 P
AFFX-BioC-3_at 16 0 20 20 20 0.8 4.5 Undef 2245.3 P
AFFX-BioDn-5_at 16 1 20 20 19 0.8 5.65 16 1988.3 P
AFFX-BioDn-3_at 16 2 20 20 18 0.8 5.11 8 6319.3 P
AFFX-CreX-5_at 20 0 20 20 20 1 8.29 Undef 18038 P
AFFX-CreX-3_at 20 0 20 20 20 1 8.09 Undef 21913.7 P
AFFX-BioB-5_st 9 7 20 20 20 0.45 0.71 1.3 847.6 A
AFFX-BioB-M_st 7 9 20 20 18 0.35 -0.35 0.8 -374 A

Total number of rows: 6595

Table truncated, full table size 321 Kbytes.




Supplementary data files not provided

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