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Sample GSM1832710 Query DataSets for GSM1832710
Status Public on Jun 12, 2017
Title 5 miRNA
Sample type RNA
 
Source name human endometrium
Organism Homo sapiens
Characteristics disease: RIF (recurrent implantation failure)
gender: female
age: 23
tissue: Endometrium
collect time: Window of implantation
Extracted molecule total RNA
Extraction protocol RNA was prepared using the TRIzol reagent following the manufacturer's recommendations. RNA was quantified using a NanoDrop-1000 spectrophotometer and quality was monitored with the Agilent 2100 Bioanalyzer (Agilent Technologies, Santa Clara, CA).
Label Cy3
Label protocol Labeled RNAs were heat denatured and hybridized to Agilent miRNA microarray, according to manufacturer's protocol.
 
Hybridization protocol According to the Agilent miRNA Microarray Protocol (Agilent Technologies).
Scan protocol After hybridization and post-hybridization washes, slides were scanned immediately in Agilent Microarray Scanner with Surescan High Resolution Technology (Agilent Technologies, Santa Clara, CA).
Description Gene expression without treatment
254606411001_1-3
Data processing Feature Extraction v10.7.3.1 (Agilent Technologies, CA) software was used to extract all features of the data obtained from the scanned images and genespring software was used to analyze the raw data, which are normalized by percentile normalization.
 
Submission date Jul 24, 2015
Last update date Jun 12, 2017
Contact name Fan Li juan
E-mail(s) 493822506@qq.com
Phone 18811778279
Organization name Peking University Peoples' Hospital
Department Reproductive medical Center
Lab Reproductive medical Center lab
Street address 11th Xizhimen south street,Xicheng district
City Beijing
State/province Beijing
ZIP/Postal code 100044
Country China
 
Platform ID GPL18402
Series (1)
GSE71332 Abberant miRNA expression profiles in recurrent implantation failure endometrium

Data table header descriptions
ID_REF
VALUE The normalized value of 90 percentile

Data table
ID_REF VALUE
Blank -9.316799
NC1_00000197 -9.316799
NC1_00000215 -9.316799
NC2_00079215 -9.316799
NC2_00092197 -9.316799
NC2_00106057 -9.316799
NC2_00122731 -9.316799
NegativeControl -9.316799
dmr_285 5.9310765
dmr_3 5.96995
dmr_308 -9.316799
dmr_316 -9.316799
dmr_31a 4.131603
dmr_6 5.3795495
hsa-let-7a-3p -9.316799
hsa-let-7a-5p 7.6788917
hsa-let-7b-3p -5.2868867
hsa-let-7b-5p 7.440904
hsa-let-7c 5.930655
hsa-let-7d-3p -9.316799

Total number of rows: 2027

Table truncated, full table size 48 Kbytes.




Supplementary file Size Download File type/resource
GSM1832710_5_miRNA.txt.gz 9.0 Mb (ftp)(http) TXT
Processed data included within Sample table

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