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Status
Public on Feb 05, 2008
Title
Nucleus accumbens
Sample type
SAGE
Anchor
Sau3A
Tag Count
89577
Tag Length
10
Source name
Wild-type mouse nucleus accumbens
Organism
Mus musculus Characteristics
Strain: C57BL/6; Gender: male; Age: 8-12 weeks; Tissue: brain, nucleus accumbens.
Extracted molecule
polyA RNA
Extraction protocol
Virlon B, Cheval L, Buhler JM, Billon E, Doucet A, Elalouf JM. 1999. Serial microanalysis of renal transcriptomes. Proc Natl Acad Sci U S A. 96:15286-91.
Description
Data provided after linker removal.
Submission date
Apr 24, 2007
Last update date
Nov 19, 2008
Contact name
Jean-Marc Elalouf
E-mail(s)
jean-marc.elalouf@cea.fr Phone
(33) 1 69088022
Fax
(33) 1 69084712
Organization name
CEA Saclay
Department
IBITEC-S
Lab
Laboratoire de PhysioGénomique
Street address
City
91191 Gif/ Yvette Cedex
ZIP/Postal code
91191
Country
France
Platform ID
GPL275 Series (1)
GSE7594 SAGE analysis of wild-type mouse brain regions
Data table header descriptions TAG COUNT TPM tags per million
Data table TAG COUNT TPM TGCTTCAATA
3689
41182.45
AACTTATACA
1492
16656.06
AACAAATCTC
1269
14166.58
TTTATAATTT
929
10370.97
AACATTCCTT
737
8227.56
AAACAACCCA
714
7970.80
TTAAAAAAAA
657
7334.47
TGAGTTCAGA
586
6541.86
TGACTCCCTC
545
6084.15
AAACTTTACC
539
6017.17
TGACGCCCTC
407
4543.58
ATGCAGACTG
360
4018.89
TGATGCCCTC
326
3639.33
TTTGCCGGCA
325
3628.16
TAACCATAGC
243
2712.75
ATGCTAGTCT
232
2589.95
GCTGGACAGG
221
2467.15
AGAGAAGCAG
209
2333.19
GCCAAGTTCA
206
2299.70
AATGATGAGG
189
2109.92
29279 545 Kbytes .Supplementary data files not provided Processed data included within Sample table
