GEO Accession viewer

NCBI > GEO > Accession Display

Not logged in | Login

GEO help: Mouse over screen elements for information.

Sample GSM191296

Query DataSets for GSM191296

Status

Public on May 25, 2007

Title

P3_AS_HDF_RCyP+_C68_B1

Sample type

RNA

Source name

Total RNA from HDF cell line

Organism

Homo sapiens

Characteristics

See publication for details

Biomaterial provider

NCI

Extracted molecule

polyA RNA

Extraction protocol

Long RNA protocol - see publication for details

Label

biotin

Label protocol

See publication for details

Hybridization protocol

See publication for details

Scan protocol

See publication for details

Description

See publication for details

Data processing

See publication for details

Submission date

May 23, 2007

Last update date

Jul 31, 2007

Contact name

Thomas R Gingeras

E-mail(s)

tom_gingeras@affymetrix.com

Organization name

Affymetrix, Inc.

Street address

3380 Central Expressway

City

Santa Clara

State/province

ZIP/Postal code

95051

Country

USA

Platform ID

GPL5301

Series (1)

GSE7576

RNA Maps Reveal New RNA Classes and a Possible Function for Pervasive Transcription

Data table header descriptions
ID_REF	CHIP_COORD_GENOMIC_COORD
VALUE	intensity
ABS_CALL	present/absent call

Data table
ID_REF	VALUE	ABS_CALL
x1875_y2475_chr10_907806	-2.5	A
x269_y37_chr10_4180975	2.25	A
x644_y817_chr10_4241090	7.75	A
x310_y1319_chr10_4658647	20.5	A
x446_y79_chr10_6411288	-2.5	A
x913_y67_chr10_6411399	-7.5	A
x315_y2477_chr10_7236219	0.5	A
x1611_y1641_chr10_7236226	-0.5	A
x1420_y203_chr10_9141957	0.5	A
x951_y593_chr10_9806064	95	A
x2306_y1115_chr10_9806069	111.625	A
x1297_y1823_chr10_11145598	0	A
x1127_y765_chr10_11145603	0	A
x2022_y835_chr10_11145608	0	A
x121_y1557_chr10_11145613	-0.5	A
x1531_y2163_chr10_11145618	-0.5	A
x560_y2291_chr10_11145662	-4.5	A
x1061_y1145_chr10_11145667	-4.5	A
x1927_y1249_chr10_11145698	-3.5	A
x2534_y1551_chr10_13673468	236.5	A

Total number of rows: 2895264

Table truncated, full table size 85181 Kbytes.

Supplementary file	Size	Download	File type/resource
GSM191296_1.CEL.bz2	22.8 Mb	(ftp)(http)	CEL
GSM191296_2.CEL.bz2	21.7 Mb	(ftp)(http)	CEL
GSM191296_3.CEL.bz2	22.3 Mb	(ftp)(http)	CEL
Processed data provided as supplementary file