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Sample GSM192244 Query DataSets for GSM192244
Status Public on May 25, 2007
Title P3_AS_HepG2_RNuP+_C20_B1
Sample type RNA
 
Source name Total Nuclear RNA from HepG2 cell line
Organism Homo sapiens
Characteristics See publication for details
Biomaterial provider NCI
Extracted molecule polyA RNA
Extraction protocol Long RNA protocol - see publication for details
Label biotin
Label protocol See publication for details
 
Hybridization protocol See publication for details
Scan protocol See publication for details
Description See publication for details
Data processing See publication for details
 
Submission date May 23, 2007
Last update date Aug 01, 2007
Contact name Thomas R Gingeras
E-mail(s) tom_gingeras@affymetrix.com
Organization name Affymetrix, Inc.
Street address 3380 Central Expressway
City Santa Clara
State/province CA
ZIP/Postal code 95051
Country USA
 
Platform ID GPL5253
Series (1)
GSE7576 RNA Maps Reveal New RNA Classes and a Possible Function for Pervasive Transcription

Data table header descriptions
ID_REF CHIP_COORD_GENOMIC_COORD
VALUE intensity
ABS_CALL present/absent call

Data table
ID_REF VALUE ABS_CALL
x2260_y145_chr10_1795569 16 A
x2002_y145_chr10_2701083 13 A
x1275_y235_chr10_2701085 13 A
x1544_y11_chr10_2701086 13 A
x2132_y163_chr10_2701088 12.5 A
x132_y41_chr10_4784887 40 A
x2387_y2035_chr10_5231264 -19.5 A
x1064_y77_chr10_5626858 5 A
x1539_y1201_chr10_5944185 30.5 A
x2042_y1471_chr10_5944333 197.5 A
x434_y367_chr10_5944338 200.5 A
x759_y559_chr10_5944343 200.5 A
x595_y999_chr10_5944348 200.5 A
x350_y1491_chr10_9356128 11.75 A
x152_y1831_chr10_9356136 10.75 A
x1955_y2351_chr10_9356142 9.5 A
x2335_y1851_chr10_9356147 10.75 A
x724_y2141_chr10_9356152 10.25 A
x176_y1715_chr10_9356157 9.25 A
x452_y2173_chr10_9356162 9.5 A

Total number of rows: 3045888

Table truncated, full table size 94170 Kbytes.




Supplementary file Size Download File type/resource
GSM192244_1.CEL.bz2 23.0 Mb (ftp)(http) CEL
GSM192244_2.CEL.bz2 22.5 Mb (ftp)(http) CEL
GSM192244_3.CEL.bz2 22.7 Mb (ftp)(http) CEL
Processed data provided as supplementary file

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