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Sample GSM192349 Query DataSets for GSM192349
Status Public on May 25, 2007
Title P3_AS_HepG2_RNuP+_C55_B1
Sample type RNA
 
Source name Total Nuclear RNA from HepG2 cell line
Organism Homo sapiens
Characteristics See publication for details
Biomaterial provider NCI
Extracted molecule polyA RNA
Extraction protocol Long RNA protocol - see publication for details
Label biotin
Label protocol See publication for details
 
Hybridization protocol See publication for details
Scan protocol See publication for details
Description See publication for details
Data processing See publication for details
 
Submission date May 23, 2007
Last update date Aug 02, 2007
Contact name Thomas R Gingeras
E-mail(s) tom_gingeras@affymetrix.com
Organization name Affymetrix, Inc.
Street address 3380 Central Expressway
City Santa Clara
State/province CA
ZIP/Postal code 95051
Country USA
 
Platform ID GPL5288
Series (1)
GSE7576 RNA Maps Reveal New RNA Classes and a Possible Function for Pervasive Transcription

Data table header descriptions
ID_REF CHIP_COORD_GENOMIC_COORD
VALUE intensity
ABS_CALL present/absent call

Data table
ID_REF VALUE ABS_CALL
x454_y13_chr10_2701086 13 A
x1852_y1757_chr10_4658649 143.75 A
x1425_y1275_chr10_5014410 31.75 A
x2140_y937_chr10_5014415 31.5 A
x2307_y1077_chr10_5944325 197.25 A
x1785_y1801_chr10_8595425 12 A
x2343_y1323_chr10_8595650 50 A
x2141_y1363_chr10_8595655 43.125 A
x1586_y595_chr10_8595660 43.375 A
x1150_y709_chr10_8595665 44 A
x2134_y2081_chr10_8595670 49 A
x1329_y919_chr10_8595792 23.5 A
x655_y2261_chr10_8595797 14.75 A
x93_y109_chr10_8595903 171.5 A
x1330_y199_chr10_8595916 188.5 A
x384_y573_chr10_8595921 182.5 A
x993_y1125_chr10_8595926 178.75 A
x1174_y1243_chr10_8595931 171.25 A
x1341_y967_chr10_8595933 171 A
x261_y711_chr10_8595938 183.5 A

Total number of rows: 2868661

Table truncated, full table size 88322 Kbytes.




Supplementary file Size Download File type/resource
GSM192349_1.CEL.bz2 22.3 Mb (ftp)(http) CEL
GSM192349_2.CEL.bz2 21.4 Mb (ftp)(http) CEL
GSM192349_3.CEL.bz2 21.8 Mb (ftp)(http) CEL
Processed data provided as supplementary file

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