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Sample GSM192394 Query DataSets for GSM192394
Status Public on May 25, 2007
Title P3_AS_HepG2_RNuP+_C70_B1
Sample type RNA
 
Source name Total Nuclear RNA from HepG2 cell line
Organism Homo sapiens
Characteristics See publication for details
Biomaterial provider NCI
Extracted molecule polyA RNA
Extraction protocol Long RNA protocol - see publication for details
Label biotin
Label protocol See publication for details
 
Hybridization protocol See publication for details
Scan protocol See publication for details
Description See publication for details
Data processing See publication for details
 
Submission date May 23, 2007
Last update date Aug 02, 2007
Contact name Thomas R Gingeras
E-mail(s) tom_gingeras@affymetrix.com
Organization name Affymetrix, Inc.
Street address 3380 Central Expressway
City Santa Clara
State/province CA
ZIP/Postal code 95051
Country USA
 
Platform ID GPL5303
Series (1)
GSE7576 RNA Maps Reveal New RNA Classes and a Possible Function for Pervasive Transcription

Data table header descriptions
ID_REF CHIP_COORD_GENOMIC_COORD
VALUE intensity
ABS_CALL present/absent call

Data table
ID_REF VALUE ABS_CALL
x2361_y147_chr10_83939 140.75 A
x2157_y1383_chr10_241991 2 A
x511_y2217_chr10_571806 0 A
x2251_y11_chr10_2701088 12.5 A
x817_y2225_chr10_3469259 2 A
x1223_y2531_chr10_4603297 2.5 A
x270_y1375_chr10_4658650 166 A
x1767_y2455_chr10_5239744 1.5 A
x2421_y1339_chr10_5239834 1 A
x1629_y2367_chr10_5240005 2 A
x2204_y1511_chr10_8595426 12 A
x206_y83_chr10_8596024 11 A
x127_y331_chr10_8596490 99 A
x99_y405_chr10_8596495 79.75 A
x726_y67_chr10_8596500 75 A
x1702_y727_chr10_8596617 270.25 A
x1243_y2273_chr10_8596647 206 A
x1064_y1139_chr10_8596749 179.5 A
x269_y2511_chr10_8596754 182 A
x528_y2227_chr10_8776211 10 A

Total number of rows: 2916102

Table truncated, full table size 89651 Kbytes.




Supplementary file Size Download File type/resource
GSM192394_1.CEL.bz2 22.2 Mb (ftp)(http) CEL
GSM192394_2.CEL.bz2 22.0 Mb (ftp)(http) CEL
GSM192394_3.CEL.bz2 21.2 Mb (ftp)(http) CEL
Processed data provided as supplementary file

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