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Sample GSM192409 Query DataSets for GSM192409
Status Public on May 25, 2007
Title P3_AS_HepG2_RNuP+_C75_B1
Sample type RNA
 
Source name Total Nuclear RNA from HepG2 cell line
Organism Homo sapiens
Characteristics See publication for details
Biomaterial provider NCI
Extracted molecule polyA RNA
Extraction protocol Long RNA protocol - see publication for details
Label biotin
Label protocol See publication for details
 
Hybridization protocol See publication for details
Scan protocol See publication for details
Description See publication for details
Data processing See publication for details
 
Submission date May 23, 2007
Last update date Aug 02, 2007
Contact name Thomas R Gingeras
E-mail(s) tom_gingeras@affymetrix.com
Organization name Affymetrix, Inc.
Street address 3380 Central Expressway
City Santa Clara
State/province CA
ZIP/Postal code 95051
Country USA
 
Platform ID GPL5308
Series (1)
GSE7576 RNA Maps Reveal New RNA Classes and a Possible Function for Pervasive Transcription

Data table header descriptions
ID_REF CHIP_COORD_GENOMIC_COORD
VALUE intensity
ABS_CALL present/absent call

Data table
ID_REF VALUE ABS_CALL
x869_y249_chr10_2701087 12 A
x1272_y1_chr10_3032063 8 A
x1006_y957_chr10_5336614 332.5 A
x1851_y561_chr10_5336700 116.5 A
x1891_y1863_chr10_5336705 115.625 A
x2541_y747_chr10_5336710 116.5 A
x2061_y2137_chr10_5336715 117.75 A
x679_y431_chr10_8702010 3 A
x649_y683_chr10_8702077 4.5 A
x407_y419_chr10_8702082 4 A
x366_y2295_chr10_8702087 6 A
x1751_y1779_chr10_8702848 4 A
x1175_y1723_chr10_8702854 4 A
x1633_y1443_chr10_8702859 3 A
x374_y909_chr10_8702921 4 A
x283_y2175_chr10_8702926 5 A
x2154_y2259_chr10_8702931 5 A
x1851_y2419_chr10_8703304 -1 A
x404_y2505_chr10_8889759 13 A
x559_y797_chr10_8889766 8.5 A

Total number of rows: 3080592

Table truncated, full table size 95190 Kbytes.




Supplementary file Size Download File type/resource
GSM192409_1.CEL.bz2 22.3 Mb (ftp)(http) CEL
GSM192409_2.CEL.bz2 21.6 Mb (ftp)(http) CEL
GSM192409_3.CEL.bz2 22.3 Mb (ftp)(http) CEL
Processed data provided as supplementary file

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