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Sample GSM192418 Query DataSets for GSM192418
Status Public on May 25, 2007
Title P3_AS_HepG2_RNuP+_C78_B1
Sample type RNA
 
Source name Total Nuclear RNA from HepG2 cell line
Organism Homo sapiens
Characteristics See publication for details
Biomaterial provider NCI
Extracted molecule polyA RNA
Extraction protocol Long RNA protocol - see publication for details
Label biotin
Label protocol See publication for details
 
Hybridization protocol See publication for details
Scan protocol See publication for details
Description See publication for details
Data processing See publication for details
 
Submission date May 23, 2007
Last update date Aug 02, 2007
Contact name Thomas R Gingeras
E-mail(s) tom_gingeras@affymetrix.com
Organization name Affymetrix, Inc.
Street address 3380 Central Expressway
City Santa Clara
State/province CA
ZIP/Postal code 95051
Country USA
 
Platform ID GPL5311
Series (1)
GSE7576 RNA Maps Reveal New RNA Classes and a Possible Function for Pervasive Transcription

Data table header descriptions
ID_REF CHIP_COORD_GENOMIC_COORD
VALUE intensity
ABS_CALL present/absent call

Data table
ID_REF VALUE ABS_CALL
x2076_y211_chr10_2701087 12 A
x1849_y139_chr10_2701088 12.5 A
x2021_y893_chr10_2701089 12.5 A
x2276_y23_chr10_2789041 5 A
x217_y67_chr10_4180975 1 A
x2001_y2109_chr10_5231259 -15 A
x2533_y2477_chr10_5231264 -19.5 A
x2176_y127_chr10_9141957 8.25 A
x1115_y1291_chr10_9804503 134.5 A
x1150_y15_chr10_9804508 116 A
x1234_y1257_chr10_9804780 42 A
x1325_y1519_chr10_9806063 102.5 A
x1974_y3_chr10_10672124 30.25 A
x1031_y1549_chr10_11542525 0 A
x2137_y1157_chr10_11542530 0 A
x2157_y2191_chr10_11542535 -0.5 A
x22_y641_chr10_11542666 -1 A
x2114_y859_chr10_11542671 0 A
x1477_y11_chr10_11542689 0 A
x292_y213_chr10_11542694 0 A

Total number of rows: 2934785

Table truncated, full table size 91327 Kbytes.




Supplementary file Size Download File type/resource
GSM192418_1.CEL.bz2 22.3 Mb (ftp)(http) CEL
GSM192418_2.CEL.bz2 21.6 Mb (ftp)(http) CEL
GSM192418_3.CEL.bz2 20.8 Mb (ftp)(http) CEL
Processed data provided as supplementary file

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