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Sample GSM192430 Query DataSets for GSM192430
Status Public on May 25, 2007
Title P3_AS_HepG2_RNuP+_C82_B1
Sample type RNA
 
Source name Total Nuclear RNA from HepG2 cell line
Organism Homo sapiens
Characteristics See publication for details
Biomaterial provider NCI
Extracted molecule polyA RNA
Extraction protocol Long RNA protocol - see publication for details
Label biotin
Label protocol See publication for details
 
Hybridization protocol See publication for details
Scan protocol See publication for details
Description See publication for details
Data processing See publication for details
 
Submission date May 23, 2007
Last update date Aug 02, 2007
Contact name Thomas R Gingeras
E-mail(s) tom_gingeras@affymetrix.com
Organization name Affymetrix, Inc.
Street address 3380 Central Expressway
City Santa Clara
State/province CA
ZIP/Postal code 95051
Country USA
 
Platform ID GPL5315
Series (1)
GSE7576 RNA Maps Reveal New RNA Classes and a Possible Function for Pervasive Transcription

Data table header descriptions
ID_REF CHIP_COORD_GENOMIC_COORD
VALUE intensity
ABS_CALL present/absent call

Data table
ID_REF VALUE ABS_CALL
x29_y1951_chr10_83485 97.5 A
x1540_y263_chr10_83490 96.75 A
x2011_y215_chr10_1388481 10 P
x1030_y667_chr10_5399436 1.25 A
x1990_y2339_chr10_5706985 87 A
x195_y1425_chr10_5944191 28 A
x1556_y15_chr10_5944330 203.75 A
x2397_y181_chr10_5944335 205.25 A
x425_y355_chr10_5944340 208 A
x1827_y2077_chr10_5944345 208.5 A
x243_y577_chr10_5944350 208 A
x234_y1303_chr10_6392015 3.25 A
x2240_y1005_chr10_6392020 2.5 A
x401_y167_chr10_6392025 1.5 A
x1343_y1067_chr10_6392030 2 A
x2382_y1233_chr10_6392035 3.5 A
x465_y2127_chr10_6392040 10 A
x702_y147_chr10_6392070 24.375 A
x31_y809_chr10_6392183 6 A
x1516_y2495_chr10_6392191 5.75 A

Total number of rows: 3063338

Table truncated, full table size 94826 Kbytes.




Supplementary file Size Download File type/resource
GSM192430_1.CEL.bz2 24.8 Mb (ftp)(http) CEL
GSM192430_2.CEL.bz2 24.6 Mb (ftp)(http) CEL
GSM192430_3.CEL.bz2 22.9 Mb (ftp)(http) CEL
Processed data provided as supplementary file

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