NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM192439 Query DataSets for GSM192439
Status Public on May 25, 2007
Title P3_AS_HepG2_RNuP+_C85_B1
Sample type RNA
 
Source name Total Nuclear RNA from HepG2 cell line
Organism Homo sapiens
Characteristics See publication for details
Biomaterial provider NCI
Extracted molecule polyA RNA
Extraction protocol Long RNA protocol - see publication for details
Label biotin
Label protocol See publication for details
 
Hybridization protocol See publication for details
Scan protocol See publication for details
Description See publication for details
Data processing See publication for details
 
Submission date May 23, 2007
Last update date Aug 02, 2007
Contact name Thomas R Gingeras
E-mail(s) tom_gingeras@affymetrix.com
Organization name Affymetrix, Inc.
Street address 3380 Central Expressway
City Santa Clara
State/province CA
ZIP/Postal code 95051
Country USA
 
Platform ID GPL5318
Series (1)
GSE7576 RNA Maps Reveal New RNA Classes and a Possible Function for Pervasive Transcription

Data table header descriptions
ID_REF CHIP_COORD_GENOMIC_COORD
VALUE intensity
ABS_CALL present/absent call

Data table
ID_REF VALUE ABS_CALL
x1815_y403_chr10_116582 25 A
x917_y2357_chr10_4043058 0.5 A
x1582_y41_chr10_5374143 -2 A
x718_y215_chr10_5374148 -2 A
x149_y2489_chr10_5549563 1.5 A
x2152_y599_chr10_6392009 4.5 A
x700_y1865_chr10_6392014 3.25 A
x1642_y963_chr10_6392019 2.5 A
x467_y961_chr10_6392024 1.5 A
x1873_y1015_chr10_6392029 2 A
x2391_y673_chr10_6392034 3.5 A
x677_y1505_chr10_6392039 5.875 A
x457_y417_chr10_6392044 15.5 A
x1265_y135_chr10_6392119 19 A
x2407_y571_chr10_6392124 19.5 A
x2263_y813_chr10_6392129 20 A
x2245_y571_chr10_6392134 15.75 A
x1266_y825_chr10_6392139 17 A
x1625_y830_chr10_6392144 19.75 A
x1553_y617_chr10_6392149 15.75 A

Total number of rows: 3200146

Table truncated, full table size 98920 Kbytes.




Supplementary file Size Download File type/resource
GSM192439_1.CEL.bz2 23.4 Mb (ftp)(http) CEL
GSM192439_2.CEL.bz2 23.1 Mb (ftp)(http) CEL
GSM192439_3.CEL.bz2 21.4 Mb (ftp)(http) CEL
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap