NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM192454 Query DataSets for GSM192454
Status Public on May 25, 2007
Title P3_AS_HepG2_RNuP+_C90_B1
Sample type RNA
 
Source name Total Nuclear RNA from HepG2 cell line
Organism Homo sapiens
Characteristics See publication for details
Biomaterial provider NCI
Extracted molecule polyA RNA
Extraction protocol Long RNA protocol - see publication for details
Label biotin
Label protocol See publication for details
 
Hybridization protocol See publication for details
Scan protocol See publication for details
Description See publication for details
Data processing See publication for details
 
Submission date May 23, 2007
Last update date Aug 02, 2007
Contact name Thomas R Gingeras
E-mail(s) tom_gingeras@affymetrix.com
Organization name Affymetrix, Inc.
Street address 3380 Central Expressway
City Santa Clara
State/province CA
ZIP/Postal code 95051
Country USA
 
Platform ID GPL5323
Series (1)
GSE7576 RNA Maps Reveal New RNA Classes and a Possible Function for Pervasive Transcription

Data table header descriptions
ID_REF CHIP_COORD_GENOMIC_COORD
VALUE intensity
ABS_CALL present/absent call

Data table
ID_REF VALUE ABS_CALL
x1340_y1563_chr10_83488 92 A
x316_y409_chr10_108972 1 A
x1177_y793_chr10_114777 2 A
x1551_y1117_chr10_115423 56.5 A
x378_y1347_chr10_115428 63.75 A
x1373_y91_chr10_115433 52 A
x2131_y1493_chr10_115438 42 A
x1443_y1035_chr10_115443 36.5 A
x316_y1009_chr10_115448 30.5 A
x2426_y883_chr10_115453 26.5 A
x1496_y813_chr10_115458 27.875 A
x745_y19_chr10_115463 22.875 A
x1598_y171_chr10_115468 15 A
x2191_y2247_chr10_115933 -0.5 A
x1739_y851_chr10_115983 -10.5 A
x2509_y601_chr10_115988 -10.5 A
x579_y2147_chr10_115993 -7 A
x2364_y729_chr10_116145 7.75 P
x1441_y809_chr10_116284 -0.5 A
x2438_y141_chr10_116374 10 P

Total number of rows: 3122705

Table truncated, full table size 95981 Kbytes.




Supplementary file Size Download File type/resource
GSM192454_1.CEL.bz2 22.6 Mb (ftp)(http) CEL
GSM192454_2.CEL.bz2 22.3 Mb (ftp)(http) CEL
GSM192454_3.CEL.bz2 21.2 Mb (ftp)(http) CEL
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap