GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM19376
Query DataSets for GSM19376
Status
Public on May 29, 2007
Title
DH5alphaF_replicate2
Sample type
RNA
Source name
E. coli logarithmic phase
Organism
Escherichia coli
Extracted molecule
total RNA
Description
E. coli transcriptome analysis
Submission date
Mar 29, 2004
Last update date
May 29, 2007
Contact name
Bettina I Harr
E-mail(s)
harrb@uni-koeln.de
Phone
0221 4706912
Fax
0221 4705975
Organization name
Institut für Genetik
Street address
Weyertal 121Dept of Genetics
City
Koeln
ZIP/Postal code
50931
Country
Germany
Platform ID
GPL73
Series (1)
GSE1154
F plasmid induced changes in expression levels in E. coli
Data table header descriptions
ID_REF
VALUE
Affymetrix MAS5.0. normalized intensity values
ABS_CALL
Affymetrix's judgement call whether a transcript is present or absent
DETECTION_P
A P value associated with the detection call
Data table
ID_REF
VALUE
ABS_CALL
DETECTION_P
AFFX-BioB-5_st
1453.9
A
0.375
AFFX-BioC-3_st
201.8
A
0.25
AFFX-CreX-5_st
4.8
A
0.749204
AFFX-CreX-3_st
7.8
A
0.999742
AFFX-DapX-5_st
7.9
A
0.712257
AFFX-DapX-M_st
10.4
A
0.986189
AFFX-DapX-3_st
11.1
A
0.904333
AFFX-LysX-5_st
4.1
A
0.990663
AFFX-LysX-M_st
12.6
A
0.916408
AFFX-LysX-3_st
4.1
A
0.971543
AFFX-PheX-5_st
6.4
A
0.99238
AFFX-PheX-M_st
5.9
A
0.999703
AFFX-PheX-3_st
8
A
0.98333
AFFX-ThrX-5_st
102
P
0.033677
AFFX-ThrX-M_st
51.1
A
0.300606
AFFX-ThrX-3_st
68
A
0.227636
AFFX-TrpnX-5_st
12.2
A
0.686277
AFFX-TrpnX-M_st
9.3
A
0.860518
AFFX-TrpnX-3_st
2.2
A
0.996405
AFFX-HXB2_5_st
3.8
A
0.960339
Total number of rows:
7312
Table truncated, full table size
259 Kbytes
.
Supplementary data files not provided
Processed data included within Sample table
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
